KEGG   Pseudomonas simiae PICF7: PFLUOLIPICF713370
Entry
PFLUOLIPICF713370 CDS       T03767                                 
Name
(GenBank) exodeoxyribonuclease
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
pff  Pseudomonas simiae PICF7
Pathway
pff03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PFLUOLIPICF713370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pff03400]
    PFLUOLIPICF713370
Enzymes [BR:pff01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     PFLUOLIPICF713370
DNA repair and recombination proteins [BR:pff03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     PFLUOLIPICF713370
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon DUF4807
Other DBs
NCBI-ProteinID: AJZ94474
Position
complement(2888574..2889953)
AA seq 459 aa
MIKDPFARLGLDREVLTVSQLNGRARVLLEDVFTNIWVEGEISNLARPASGHVYFTLKDS
GAQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF
DALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPT
AVQGREAIPQIVRALKLADARGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNRLSHDRLR
LEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQHPGRQL
ALLRQRLDSLAERLPRAMREGLKSRRLQLQSQMQTLHVVSPLATLGRGYSILLDERGQAI
RNAAQTHTGQRLTARLGEGQLQVRVEDNHLTPVTLSLLD
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgattaaagatccttttgcccgcctgggcctggaccgcgaagtcctgactgtcagccag
ctcaacggccgtgcgcgggtgttgctggaagacgtgttcaccaatatctgggtcgaaggc
gagatctccaaccttgcccgcccggcctctggtcatgtgtatttcaccctcaaggacagc
ggcgcgcaggtgcgttgcgcgctgtttcgcaacaacgccgcgcgggtgcgtcaggcgttg
aaagatggcctggcagtgaaggtgcgcggcaaggtttcgctgttcgagggccggggtgat
taccagctgatcctggataccgtggagcccgccggtgatggagcattgcgcctggcgttc
gatgcactgaaggaaaaactcagcgccgaaggcttgttcagcgccgaacgcaaagtgccg
ttgccggcgcaccctcggcgcattggcatcatcagttcgccgactggcgcggtaatccgc
gacatcatcagtgtgttccggcgtcgcgcacccaacattgaactgacgctgatcccgacc
gccgtgcaaggccgcgaagcgatcccgcaaattgtgcgcgcattgaaactggcagatgcg
cgtggcttcgatgcgctgatcctggcccggggcggtggttcgctggaagacctctggtgt
ttcaacgaagaagctgtggcccgtgcggtggacgcttgcgtcacgccaatcgtcagcgct
gtcgggcatgagaccgatgtgtccatcagcgatttcgtggccgacgtccgcgccccgacg
ccctccgctgcagcggaattgctcgcgccggacgccagccatctggtgcgccaggtcgag
aacctgcatcgccgcctggtgatgctgatgcgcaaccgcctgagccacgaccgcctgcgc
ctggagggcatggcgcgacgtctgcgtcaccctggcgagcgcctgcgccagcaagcccag
cgcctggatgatctggacatgcgcctgcgccgagctttcgagcgcagcctcaatacccgc
cgtgagcgcctgatccgcctggaaacccgcctcgccggccaacaccctggcaggcaactg
gcgttgctgcgccaacgcctggacagcctcgccgaacgcctgccccgcgccatgcgcgaa
ggcctcaagtcgcggcgcctgcagctgcaaagccagatgcagacgctgcacgtggtcagc
ccgctggcgaccctgggccgtggttacagcatcctgctggacgaacgcggccaggccatt
cgcaatgccgcccaaacccacaccggccagcgcctcaccgcacgtctcggtgagggccaa
ttgcaagtgcgggtggaagacaaccacctgacacccgtcaccctttcgttattggactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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