KEGG T02183: PFC

Pyrococcus furiosus COM1: PFC_10430

Entry

PFC_10430 CDS T02183

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

pfi Pyrococcus furiosus COM1

Pathway

pfi03030	DNA replication
pfi03410	Base excision repair
pfi03420	Nucleotide excision repair
pfi03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:pfi03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:pfi03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pfi03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:pfi03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_OB_2 mRNA_cap_enzyme UCR_UQCRX_QCR9

Other DBs

NCBI-GI:

397652716

NCBI-GeneID:

13300654

UniProt:

I6V1U3

Structure

PDB:

2CFM

Position

complement(1877584..1879269)

AA seq 561 aa
MRYLELAQLYQKLEKTTMKLIKTRLVADFLKKVPDDHLEFIPYLILGEVFPEWDERELGV
GEKLLIKAVAMATGIDAKEIEESVKDTGDLGESIALAVKKKKQKSFFSQPLTIKRVYQTL
VKVAETTGEGSQDKKVKYLADLFMDAEPLEAKYLARTILGTMRTGVAEGLLRDAIAMAFH
VKVELVERAYMLTSDFGYVAKIAKLEGNEGLAKVQVQLGKPIKPMLAQQAASIRDALLEM
GGEAEFEIKYDGARVQVHKDGSKIIVYSRRLENVTRAIPEIVEALKEAIIPEKAIVEGEL
VAIGENGRPLPFQYVLRRFRRKHNIEEMMEKIPLELNLFDVLYVDGQSLIDTKFIDRRRT
LEEIIKQNEKIKVAENLITKKVEEAEAFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLK
IKPTMENLDLVIIGAEWGEGRRAHLFGSFILGAYDPETGEFLEVGKVGSGFTDDDLVEFT
KMLKPLIIKEEGKRVWLQPKVVIEVTYQEIQKSPKYRSGFALRFPRFVALRDDKGPEDAD
TIERIAQLYELQEKMKGKVES

NT seq 1686 nt +upstreamnt +downstreamnt
atgaggtatctagagcttgctcaactttatcaaaagttagaaaagacaactatgaaactt
ataaagactagacttgtcgccgacttcctgaaaaaagtaccagatgatcatctggagttc
attccctatctaattcttggagaagtttttccagagtgggatgaaagggagctgggtgtg
ggagaaaagctgttaattaaagctgtagcaatggccactggaattgacgcaaaagaaatc
gaagagtctgtaaaagatactggagaccttggagagagcatagccttagctgtaaagaaa
aagaagcagaagagcttcttctctcagcccctcacaataaagagggtatatcaaaccctt
gtaaaggttgcagaaacaacgggggagggaagccaagataaaaaagtaaagtatctagct
gatttgttcatggacgcagaacctttagaagctaagtatcttgctcgtacaatcttagga
acaatgagaacaggagttgcagaaggattgcttagagatgcaatagcaatggcattccac
gtaaaggtagagcttgttgagagagcttacatgctaacgagtgatttcggatatgtagct
aaaatagcaaagcttgaaggaaatgaagggctagcaaaagttcaagttcaactcggaaag
ccaataaagccaatgcttgcccagcaagctgctagcataagagatgcacttctcgagatg
ggtggagaggcagagttcgagattaaatacgatggagcaagggtgcaggtgcacaaggat
ggctcaaaaattatagtctattctagaagactggagaacgtcaccagagcgattccagaa
attgttgaggctctaaaagaggcaataatacctgaaaaggcaatagtggaaggagaactt
gtggcaattggagaaaacggaagaccattgcccttccaatatgtgcttagaaggtttagg
agaaagcataacatagaagaaatgatggaaaagatacctctcgagctcaacttattcgac
gttctctacgtagatggacaaagcttgattgacactaagttcattgatagaagaagaaca
cttgaagaaataataaagcagaatgaaaagataaaggtagcagaaaacctaataacaaag
aaagtcgaggaagcagaggcattttacaagagagcactcgaaatggggcacgagggattg
atggccaagaggttagatgcagtctacgaaccaggtaacagaggaaagaagtggttgaag
ataaagcccacaatggagaacttagatttagtaatcataggagcagaatggggagaggga
agaagagcccatctctttggttcattcatcctgggagcatatgatccagaaacaggagaa
ttcctagaggtaggaaaagtgggaagtggattcacagatgatgacttagttgagtttacg
aagatgctaaagccccttattataaaagaggaaggaaagagagtctggctccagcccaaa
gttgttattgaagtgacatatcaagaaattcagaagagtccaaaatacagaagtggattt
gcattaaggttcccaaggttcgttgcacttagagatgataaaggaccagaagatgcagat
acaatagagagaatcgcacaactttacgagttgcaagaaaagatgaaaggaaaagtggaa
agctaa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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