KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_126773
Entry
MYCFIDRAFT_126773 CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MYCFIDRAFT_126773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfj03019]
    MYCFIDRAFT_126773
Messenger RNA biogenesis [BR:pfj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MYCFIDRAFT_126773
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MYCFIDRAFT_126773
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 19330620
NCBI-ProteinID: XP_007921405
JGI: 126773
UniProt: N1Q6X7
Position
Unknown
AA seq 144 aa
MQLDWTDEQQPQMFTTAAQLLDLTDKKLMVVLRDGRKLIGVLRSWDQFGNLVLQDTIERL
FVHDLYADIERGLFLVRGENVLILGEIDLDKDDYIPEPYQLAPAEKVFELKKQQDQERKK
TDKSKFKKLAELGFEGEHAGEVLF
NT seq 435 nt   +upstreamnt  +downstreamnt
atgcaattggattggactgacgagcaacagcctcaaatgttcacaaccgccgcccaactc
ctcgatcttaccgacaaaaagctgatggtagttctacgtgatggccgaaagctcattggg
gtcttgaggagttgggaccagttcggcaacctcgtgcttcaagacaccattgagcgattg
ttcgtgcacgacttatacgccgacatagaacgcgggctttttctcgtgcggggagaaaac
gtcctcatcctgggtgaaattgacctcgacaaggacgattacatcccagaaccatatcag
ctggcaccagccgagaaagtctttgagctgaagaagcagcaagaccaggagaggaagaag
acagacaaatcaaagtttaagaaactcgcagaactaggcttcgagggagagcatgctggg
gaggtattgttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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