KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_154357
Entry
MYCFIDRAFT_154357 CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03022  Basal transcription factors
pfj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    MYCFIDRAFT_154357
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYCFIDRAFT_154357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfj03021]
    MYCFIDRAFT_154357
   03400 DNA repair and recombination proteins [BR:pfj03400]
    MYCFIDRAFT_154357
Enzymes [BR:pfj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MYCFIDRAFT_154357
Transcription machinery [BR:pfj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     MYCFIDRAFT_154357
DNA repair and recombination proteins [BR:pfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     MYCFIDRAFT_154357
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD AAA_34 DUF4820
Other DBs
NCBI-GeneID: 19331753
NCBI-ProteinID: XP_007927266
JGI: 154357
UniProt: M2YVC6
Position
Unknown
AA seq 807 aa
MSEGGAPARSKKYEGIVQRYQPQTYQKSQAAYAGRDAASHLFKPSRDYFNEPLKPDHHLR
PLWIDPQNGKVVLETFAPSFKQAQNFLINIAEPQSRTTNMHEYTISPHSLFAAVSVGLTE
QDIVRDLELFSKTKVPENIINFVHEVTQSFGKVRLVLKHNKYFVESNDASVLQMLLRDPV
ISSCRVDDSDELKTEKAAKKGDLIIGGTEEATRAKNAMAQIEQQQKREDDDEEDSDDEYG
GRQAEKDMTEFLREEEDDDDTDQVHSFEVDGEKIQLVQEHCNVKLKLPLTEEYDFRADDI
NANLDIDLKPNVQIRYYQEHALSKMFGNGRARSGIIVLPCGAGKTLVGITAACTVKKSAI
VLCTSAMSAVQWKDEFKKWSNINPDDIVIFTSGEKQKLRDKAGVIICTYSMVTQNTRRAH
DSKVVMDFIMSREWGLMVLDEVHVVPAEMFRRVTERIKTHSKLGLTATLLREDDKIKDLN
FLIGPKLYEANWLQLSEEGHIARVQCAEVWCPMTTEFYSEYLSAQTTNKRGLLSTMNPRK
FQACQFLINFHESRGDKIIVFSDNVYALRKYAEALQKPFIFGDTSQKEREMVLANFQMND
AVSTIFLSKIGDTSLDLPEATCLIQVSSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYS
LVSKDTNEMFYSSKRQAFLVDQGYAFKVITHLNGIEKMPNLKFTTQQERMTALQDVLLQS
ETAGDVEDIKDDLFSDRNVSRGKAKGKGVRRQAGTLSSLAGGENMAYYEYSKNNPNKALA
AKPRNQFFKKHEKQQERKRKAAREMLE
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgtcggaaggcggtgcgccggcgaggagtaaaaagtatgaaggaatagtgcagcgatat
caaccccagacctatcagaagtcgcaagctgcgtacgctggtcgtgacgccgccagtcat
ctattcaaacccagtcgtgattatttcaacgagcctctcaagcccgaccaccatctgcgg
ccgctgtggatcgacccgcagaatgggaaggtcgtccttgagacctttgctcccagcttc
aagcaagcccagaacttccttattaatatcgcagagcctcaaagtcgcacaacgaacatg
cacgaatacactataagtcctcacagtctattcgcggccgttagcgtaggtctcacggag
caagacatcgtccgtgatcttgaactcttctccaaaacaaaagtgccggagaacatcatt
aatttcgtccacgaagtcacacaatctttcggaaaggtgcgacttgtgctgaagcacaac
aaatacttcgtcgaaagcaatgacgcgtccgtacttcagatgcttctgcgagatccagtc
attagctcttgccgcgtggacgactccgacgagctgaagaccgagaaggcggccaagaag
ggcgatctgatcatcggtggcacagaagaggcgactcgagcgaagaacgccatggcacag
atcgaacagcaacagaagagagaagacgacgacgaagaggacagcgacgacgaatatggt
ggccgtcaagctgagaaggacatgaccgaattcttgcgcgaggaggaagacgatgacgat
accgaccaagtacactcgttcgaggtcgatggcgaaaagatccagctcgtgcaagaacac
tgtaatgtgaagctcaagctgcctctgaccgaagaatacgacttcagagcagacgatatc
aacgctaatctcgacattgacctcaagccgaacgtccagattcgctactaccaagaacac
gcgcttagcaaaatgtttggcaacggacgcgctagaagcggaattatcgtgctgccctgt
ggtgccggcaagacactagtcggcattactgcagcatgtacggtcaagaagagcgcgatt
gtgctttgcactagcgcaatgagtgccgtgcagtggaaagatgaatttaagaagtggtca
aacatcaatccagacgacatagtaatcttcaccagtggcgaaaagcagaagctcagggac
aaagcaggtgtcatcatctgcacatacagcatggtcacgcaaaacacacggcgcgcgcat
gacagcaaggtggtcatggacttcatcatgtctcgtgagtggggattaatggttctggac
gaggtgcatgtcgtgcccgcagaaatgttcaggcgtgtgacagaacgcattaagacacat
tcgaagcttgggctgaccgcaacacttctccgcgaagacgataagattaaggatctgaat
ttccttatcgggcccaagttatacgaggccaactggctgcagctaagcgaagaaggccac
attgcacgcgttcaatgtgcggaggtctggtgtccaatgactactgagttctactctgag
tatctgtcagctcagacgaccaacaagcgcggcttgctgtctaccatgaatccgaggaag
tttcaagcatgccagttcttaatcaacttccacgagagcagaggcgacaagatcattgtc
ttttcggacaatgtgtatgctctgcgaaaatacgcggaagcgctacaaaagccattcatt
tttggtgatactagccagaaggaacgagaaatggtgctagccaacttccagatgaacgat
gcagtctcgacaatcttcctctccaagatcggtgacacttctctggatctgccagaggca
acctgtctcatacaagtctcctctcattacggctcgcgtcgccaagaagcgcagcgcctt
ggtcgtatcctgcgagcgaagcgacgaaacgacgagggctttaacgcattcttctactct
ctggtttccaaggacacaaacgagatgttctactcttccaaacgccaggccttcctcgtc
gatcaaggctacgctttcaaagttattacacatctcaacggcatcgagaagatgccgaac
ctcaaattcaccacccagcaggagcgaatgactgccctgcaagatgtattactacaaagc
gagacggccggcgatgtcgaagatatcaaagacgatctcttctccgatcgaaatgtctcg
cgcggcaaggcgaagggtaaaggcgtgcggaggcaggctggtacgctgtcctcactggcc
ggaggagaaaatatggcatactacgaatacagcaagaataatcccaataaagcgctcgcc
gcaaagcctcgtaatcagttttttaagaagcacgagaagcaacaggagcggaagaggaaa
gcggcgcgggagatgcttgaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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