KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_57424
Entry
MYCFIDRAFT_57424  CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCFIDRAFT_57424
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfj03041]
    MYCFIDRAFT_57424
   03032 DNA replication proteins [BR:pfj03032]
    MYCFIDRAFT_57424
Spliceosome [BR:pfj03041]
 Complex A
  U1 snRNP components
   Sm proteins
    MYCFIDRAFT_57424
  U2 snRNP components
    MYCFIDRAFT_57424
 Complex B
  U1 snRNP components
    MYCFIDRAFT_57424
  U4/U6.U5 tri-snRNP components
    MYCFIDRAFT_57424
 Complex C
  U2 snRNP components
    MYCFIDRAFT_57424
DNA replication proteins [BR:pfj03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     MYCFIDRAFT_57424
SSDB
Motif
Pfam: LSM SM-ATX DUF3247
Other DBs
NCBI-GeneID: 19340373
NCBI-ProteinID: XP_007931317
JGI: 57424
UniProt: M3AKB4
Position
Unknown
AA seq 129 aa
MKLVRFLMKCTNETVTIELKTGTIVQGTIASVSPQMNTNLRNAKMTPKGGSQISLDHISV
RGSEIRYYILPDSLPLDTLLIDDAPKPKNKARKEQDKGAGGGGMRGGRGGRGGGRGGPRG
RGRGRGRGF
NT seq 390 nt   +upstreamnt  +downstreamnt
atgaagctcgtcaggttcttgatgaaatgcaccaacgagacggtcacgatcgagcttaag
actggcaccatcgtccaaggcaccatcgcttccgtctccccacagatgaataccaacttg
cgcaatgcgaagatgactccaaaaggcggatcgcaaatcagtctggatcacatcagcgtt
agaggcagcgaaatcagatattatatcctcccagacagcttgccgcttgacacactgctc
attgatgacgcaccgaagcccaagaataaggcacggaaggaacaggataagggtgctggc
ggtggtggcatgagaggtggacgaggtggtcgtggaggtggccgtggcggacccagaggc
agaggtcgtggacggggcagagggttctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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