KEGG   Pseudomonas frederiksbergensis: PFAS1_13640
Entry
PFAS1_13640       CDS       T04786                                 
Name
(GenBank) sarcosine oxidase subunit alpha
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk00260  Glycine, serine and threonine metabolism
pfk01100  Metabolic pathways
Module
pfk_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PFAS1_13640
Enzymes [BR:pfk01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     PFAS1_13640
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     PFAS1_13640
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored FAD_binding_2 DAO NAD_binding_8 HI0933_like Pyr_redox_3 GIDA FAD_binding_3 Pyr_redox Thi4 AlaDh_PNT_C Lycopene_cycl NAD_binding_9
Other DBs
NCBI-ProteinID: APV40346
UniProt: A0A1P8EVV4
Position
2950533..2953550
AA seq 1005 aa
MSQINRLSNGGRIDRNKVLSFTFNGQTYKGFEGDSLAAALLANGVDIIGRSFKYSRPRGI
FAAGAEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDYMNQHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDSRESLDGKPATEWVASVITELKNTPDVLL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGTHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWLDASLQVVAIADARSN
PRGALVEEARAKGIRILTGSAVIEARGSKHVTAARVAAIDVKAHTVTSPGEWLDCDLVAS
SGGYSPVVHLASHLGGKPIWREDILGFVPGEAPQKRVCVGGINGVYGLGDSLVDGFAGGA
RAASEAGFSVVEGTLPKALSRLEEPTLALFQVPHEKNTARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVTIPQMGTTMFRPNYTPVTF
GAVAGRHCGHIFEPVRFTALHHWHVKNGAEFEDVGQWKRPWYFPKNGEDLHTAVKRECKA
VRDSVGLLDASTLGKIDIQGPDSREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFVMTTTTGGAARVLQWLEIYHQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSEVTDIDLSNEAFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEKIVE
AGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDSSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVRDQRKQLVGLKPIDPTKWLPEGAQLVFNTKQTIPMTMVGHVTSSYLHNSLGYSF
AMGVVKGGLKRMGERVFAPLADGSVIEAEIVSSVFFDPKGDRQNV
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgagccagatcaatcgcctgtccaacggcggacgcatcgaccgtaacaaagtgctgagc
ttcaccttcaacggccagacctacaaaggctttgagggcgattctttggccgcggccttg
ctggccaacggtgtcgatatcatcggtcgtagcttcaagtactcgcgtccacgcggcatc
ttcgccgccggtgccgaagagccgaacgccgtgctgcagatcggcgcgaccgaagccacg
cagatcccgaacgtacgcgccacgcaacaagcgctgtatcaaggtttggtcgccaccagc
accaacggctggccgagcgtgaacaacgacatgatggggattctcggcaaggtcggcggc
aagctgatgccgccgggcttctactacaaaaccttcatgtacccgcaatcgttctggatg
acttacgagaagtacattcgtaaggctgctggtcttggccgctcgccgaccgagaacgat
ccggacacctacgactacatgaaccagcactgcgacgtgctgatcgtcggcgctggccct
gctggcctggccgctgcactggcagctgcccgcagcggtgcccgtgtgatcctggccgat
gaacaggaagagttcggcggcagcctgctcgattcccgcgaaagcctcgacggcaagcct
gccaccgagtgggttgccagcgtcatcaccgagctgaaaaataccccggacgtgttgctg
ttgccccgcgccacagtcaatggttaccacgaccacaacttcctgaccattcacgagcgc
ctcaccgatcacctcggcgaccgcgccccgatcggccaggtgcgtcagcgcatccaccgg
gttcgcgccaagcgtgtcgtgctggcgaccggtactcacgagcgtccactggtttacggc
aacaacgacgtgccgggcaacatgctcgccggcgctgtgtcgacttacgtgcgtcgttac
ggcgtggcaccgggcaagaaactggtgctgtcgaccaacaacgatcacgcctatcgcgtt
gcactggattggctcgacgccagcctgcaagtcgtggcgatcgccgacgcccgcagcaac
cctcgcggtgcgctggtggaagaagcgcgcgccaagggcatccgcatcctgaccggcagc
gctgtgatcgaggcccgtggcagcaagcacgtcaccgccgctcgcgttgccgcgatcgat
gtcaaagcacacaccgtgaccagcccgggcgagtggctcgattgcgacctggtcgccagt
tctggcggttacagcccggtggttcacctggcgtcgcacttgggtggcaagccgatctgg
cgtgaagacatcctcggtttcgtaccgggcgaagcaccgcagaaacgcgtgtgcgtaggt
ggcatcaacggcgtctatggcctcggcgattccctggtcgatggttttgcaggtggtgct
cgcgccgccagcgaagccggtttcagcgtggtcgaaggcaccttgccgaaagccctgagc
cgtctggaagagccaacactggcgctgttccaggtgccgcatgaaaagaacaccgcacgt
gcgccgaagcaattcgtcgacctgcagaacgacgtcaccgctgccgccatcgaactggcg
acccgcgaaggtttcgagtcggtcgagcacgtcaagcgctataccgcactgggcttcggt
acggaccagggcaagctcggcaacgtcaacggcctggccatcgccgcccgttcgttgaac
gtgaccatcccgcagatgggcaccaccatgttccgtccgaactacacgccggtaaccttc
ggcgccgtggccggccgtcactgtgggcacatcttcgagccggtacgtttcaccgcgctg
catcactggcatgtgaagaatggcgctgaatttgaagacgttggtcagtggaagcgtcct
tggtacttcccgaaaaacggtgaagacctgcacaccgccgtgaagcgtgaatgcaaagcc
gtgcgcgacagcgtcggcctgctggacgcttcgaccctgggcaaaatcgacatccagggc
ccggattcgcgtgagttcctcaaccgcatctacaccaacgcctggaccaagctcgacgtg
ggcaaggcccgctacggcctgatgtgcaaagaagacggcatggtgttcgacgacggcgtt
accgcttgtctcgccgacaaccatttcgtgatgaccaccaccaccggcggcgctgcacgc
gtgctgcaatggctggaaatctaccaccagaccgaatggccagatctgaaggtgtatttc
acgtccgtgacggatcactgggcaaccatgaccctgtccgggccgaacagccgcaagctg
ctcagcgaagtcaccgacatcgacctgagcaacgaagccttcccgttcatgacctggaaa
gaaggcctggtcggcggtgtgccggcgcgggtgttccggatttcgtttaccggtgaactg
tcgtacgaagtcaacgttcaggccgactacgccatgggcgttctggaaaaaatcgtcgag
gccggcaagaagtacaacttgacgccttacggcaccgaaaccatgcacgttctgcgggcg
gagaagggcttcatcatcgtcggtcaggacactgacagctcgatgaccccggatgacctg
aacatgggctggtgtgtcggtcgcaccaaaccgttctcgtggatcggctggcgtggcatg
aaccgcgaagactgcgtgcgtgatcagcgcaaacagctggtcggtctgaagccgatcgat
ccgaccaaatggctgccggaaggggcgcaattggtgttcaacaccaagcaaaccattccg
atgaccatggtcggtcacgtgacttccagttacctgcacaactccctgggctattcgttt
gccatgggtgtggtcaagggcggcttgaagcgcatgggtgagcgggtgttcgcaccgctg
gccgacggcagcgtgatcgaggcggaaatcgtttcttcggtgttcttcgatccgaaaggc
gatcgccagaacgtctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (40)   

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