KEGG   Pseudomonas protegens Pf-5: PFL_0545
Entry
PFL_0545          CDS       T00249                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV, B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pfl  Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfl03032]
    PFL_0545 (parE)
   03036 Chromosome and associated proteins [BR:pfl03036]
    PFL_0545 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pfl02048]
    PFL_0545 (parE)
Enzymes [BR:pfl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     PFL_0545 (parE)
DNA replication proteins [BR:pfl03032]
 Prokaryotic type
  DNA Topoisomerases
   PFL_0545 (parE)
Chromosome and associated proteins [BR:pfl03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    PFL_0545 (parE)
Prokaryotic defense system [BR:pfl02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    PFL_0545 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2 HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: AAY95954
UniProt: Q4KJ94
Position
634854..636758
AA seq 634 aa
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTTRPNHLAQEVIDNSVDEALAGHAKSIQ
VILHADHSLEVSDDGRGMPVDIHPEEGVSGIELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSNQVRVRVKRDGNEYQMTFADGYKATELEVVGTVGKRNTGTSVYFAPDPKYFDS
PKFSVSRLKHVLKAKAVLCPGLLVSFEDKSSGEKVEWHYEDGLRSYLVDAVSEFERLPAE
PFCGSLAGNKEAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRNLLPRGLKLAPEDVWERIAFVLSMKMQDAQFSGQTKERLSSREAAAFVSGVVKDAFSL
WLNANPELGMQLAELAISNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAED
MSQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIY
YALDEAERDGILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDV
EATAEIMDMLLAKKRAGDRKSWLESKGNLAEVLA
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccactcccagcgctagctcttataacgcagacgccatcgaagtcctctcgggactc
gacccggtgcgcaaacgcccgggcatgtacaccgacaccacgcggcccaaccatttggcc
caggaagtcatcgacaacagcgtcgacgaagccctggccggccatgcgaagtcgatacag
gtcatcctgcacgccgaccattccctggaagtgtccgacgacggccgcggcatgcccgtg
gacatccacccggaagaaggcgtgtccgggatcgagctgatcctcaccaagctccacgcc
ggcggcaagttctccaacaagaactaccagttctccggcggtctgcacggggtgggcatc
tccgtggtcaacgccttgtcgaaccaggtgcgggtgcgggtcaagcgcgacggcaacgaa
taccagatgactttcgccgacggctacaaggccaccgagctggaagtggtcggcaccgtg
ggcaaacgcaacaccggcaccagcgtgtacttcgctccggacccaaaatacttcgactcg
ccgaaattctccgtcagccgtctcaagcacgtgctcaaggccaaggccgtactctgcccg
gggctgctggtgagcttcgaggacaagtccagcggcgagaaggtcgagtggcactacgaa
gatggcctgcgctcctacctggtggatgcggtcagtgaattcgaacgcctgccggccgag
ccgttctgcggcagcctggcagggaacaaggaagcggtggactgggccctgttgtggctg
cccgaaggcggcgacagcgtccaggaaagctacgtcaacctgatccccacggcccagggc
ggcacccatgtcaacggcctgcgccagggcctgctggatgccatgcgcgagttctgcgag
ttccgcaacctgctgccccgcggcctgaagctggccccggaagacgtctgggagcgcatt
gcctttgtcctgtcgatgaaaatgcaggatgcgcagttctccggccagaccaaggagcgc
ctgtcatcccgcgaggcggcggcgttcgtttccggggtggtcaaggacgccttcagcctg
tggctcaacgccaaccccgagctgggcatgcaactggcggagctggccatcagcaacgcc
gggcgccgcttgaaggccagcaagaaggtcgagcgcaagcgcattacccagggcccggca
ctgccaggcaagctggcggactgcgccggccaggacccgatgcgctccgagctgttcctg
gtggagggtgactccgccggcggttcggccaagcaggcgcgggacaaggaattccaggcg
atcctgccgttgcgcggcaagatcctcaacacctgggaagtggacggcagcgaggtcctg
gccagccaggaagtgcacaacatcgccgtggccatcggggtcgatccgggcgccgaggac
atgagccaactgcgctacggcaagatctgcatcctcgccgacgccgactccgacggcttg
cacatcgctaccttgctgtgtgccttgttcgtccagcatttccgtccgctggtggatgcc
ggtcacgtctacgtggccatgccgccgctgtaccgcatcgacctgggcaaggagatctac
tacgccctggatgaagccgagcgcgacggcattctcgaccgcctggtggccgagaagaag
cgcggcaagccacaggtcacccgattcaaggggttgggtgaaatgaacccgccgcaactg
cgcgagaccaccatggacccgaacacccggcgcctggtgcagttgaccctggacgacgtc
gaggccaccgcggaaatcatggacatgctgctggccaagaagcgcgccggtgatcgcaag
tcctggctggagtccaagggcaacctggccgaggtgctggcctga

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