KEGG   Pseudomonas protegens Pf-5: PFL_1065Help
Entry
PFL_1065          CDS       T00249                                 

Gene name
holC
Definition
DNA polymerase III subunit chi (EC:2.7.7.7)
Orthology
K02339  
DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
Purine metabolism
Pyrimidine metabolism
Metabolic pathways
DNA replication
Mismatch repair
Homologous recombination
Module
DNA polymerase III complex, bacteria
Brite
KEGG Orthology (KO) [BR:pfl00001]
 Metabolism
  Nucleotide metabolism
   00230 Purine metabolism
    PFL_1065 (holC)
   00240 Pyrimidine metabolism
    PFL_1065 (holC)
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    PFL_1065 (holC)
   03430 Mismatch repair
    PFL_1065 (holC)
   03440 Homologous recombination
    PFL_1065 (holC)
Enzymes [BR:pfl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PFL_1065 (holC)
DNA replication proteins [BR:pfl03032]
 Prokaryotic Type
  DNA Replication Elongation factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PFL_1065 (holC)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JCVI-CMR: 
UniProt: 
Position
complement(1215463..1215891)
Genome map
AA seq 142 aa AA seqDB search
MTKVDFYILPSADPAARLDFACKLTDKAWRMGHRIYLHCSDAEQRDELDARLWRFKGETF
VPHGPAESEPEGLIVLGLGQDPGPHNDLLVNLDLKVPAFAPRFARIAEVVVEDPAIRQAA
RESFRFYREQGYPLQDHRLQRL
NT seq 429 nt NT seq  +upstreamnt  +downstreamnt
atgaccaaagtcgacttctatattcttcccagcgcggaccctgcggcgcgcctggatttt
gcctgcaagctcaccgacaaggcctggcgcatgggccaccgcatctacctgcattgcagc
gatgcagagcaacgggacgagctcgatgcccgcctgtggcgcttcaagggcgaaaccttc
gtcccccacggcccggcggaaagcgaacccgaaggcctgatcgtcctcggcctcggccag
gaccccggcccccacaatgacctgctggtgaacctggacctgaaagtgccggccttcgcc
ccgcgttttgcccggattgccgaggtggtggtggaagaccccgctattcgtcaggcggcc
cgcgagagtttccgtttctatcgcgaacagggctatcctctgcaagatcaccgtttacag
cgactctga

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