KEGG   Pseudomonas protegens Pf-5: PFL_1165Help
Entry
PFL_1165          CDS       T00249                                 

Gene name
dapE
Definition
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
pfl00300  Lysine biosynthesis
pfl01100  Metabolic pathways
pfl01120  Microbial metabolism in diverse environments
pfl01230  Biosynthesis of amino acids
Module
pfl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pfl00001]
 Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    PFL_1165 (dapE)
Enzymes [BR:pfl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     PFL_1165 (dapE)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28 BNR_2
Motif
Other DBs
NCBI-ProteinID: AAY90452
UniProt: Q4KHI7
Position
complement(1332622..1333773)
Genome map
AA seq 383 aa AA seqDB search
MTAHAELSPTLQLACDLIRRPSVTPIDADCQKLMMQRLGDAGFKLEPMRIEDVDNFWASH
GQHEGPVLCFAGHTDVVPTGPVQAWQNDPFDALIDEHGMLCGRGAADMKGSLAAMLVAAE
RFVTDYPDHKGSVAFLITSDEEGPAHHGTKAVVERLAARKERLDWCIVGEPSSTSLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDDGNAFFPPTSFQ
ISNLNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQQRVAAILDKHGLDWHVEWALSGLP
FLTEPGALLDAVSASIKQVTGRDTKASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RVLASDLDVLTEIYYQTLIKLLA
NT seq 1152 nt NT seq  +upstreamnt  +downstreamnt
atgacggcccatgccgagctttcgccgaccctgcaacttgcctgtgatctgatccgtcgc
ccctcggtgacgccgatcgacgccgactgccagaagctgatgatgcagcgcctgggggat
gccggcttcaagctggaaccgatgcgcatcgaggacgtggacaacttctgggccagccat
ggccagcatgaaggcccggtgctgtgttttgccggccacaccgacgtggtgcctaccggc
ccggtccaggcctggcagaacgacccgttcgacgctctgatcgacgagcacggcatgctc
tgcggccgtggcgcagcggacatgaagggcagcctggcggccatgctggtagccgctgag
cgtttcgtcaccgactacccggaccacaagggctcggtagccttcctcatcaccagcgac
gaagaaggccccgcgcaccatggcaccaaggccgtggtggagcgcctggcggcacgcaag
gagcgcctggactggtgcatcgtcggtgagccttcgagcaccagcctggtgggcgacgta
gtcaagaacggccgccgcggctccctcggcgccaagctcaccgtgcgcggggtgcagggc
cacgtggcctacccgcacctggcgaagaacccgatccacctggcggcaccggccctggcg
gaactggcggcggagcactgggatgacggcaacgccttcttcccacccaccagtttccag
atctccaacctcaattccggcaccggcgccaccaacgtgatccccggtgatctggtggcg
gtgttcaacttccgcttctccaccgaatccacggtggaaggcctgcagcagcgggtcgcg
gccatcctcgacaagcacggcctggactggcatgtggagtgggccctgtccggcctgccg
ttcctcaccgaacccggcgccctgctggacgcggtatcggccagcatcaagcaggtcacc
gggcgcgacaccaaggcctccaccagtggcggcacctccgacgggcgcttcatcgccacc
ctgggcacccaggtggtggaactgggcccggtcaacgccaccatccatcaggtcaacgag
cgggtactggccagcgacctcgatgtgctgaccgaaatctactaccagaccctgatcaag
ttgctcgcctga

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