KEGG   Pseudomonas protegens Pf-5: PFL_1788
Entry
PFL_1788          CDS       T00249                                 
Symbol
rluC
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
pfl  Pseudomonas protegens Pf-5
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfl03009]
    PFL_1788 (rluC)
Enzymes [BR:pfl01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     PFL_1788 (rluC)
Ribosome biogenesis [BR:pfl03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PFL_1788 (rluC)
SSDB
Motif
Pfam: PseudoU_synth_2 S4 RedAm-like_C
Other DBs
NCBI-ProteinID: AAY91077
UniProt: Q4KFS5
Position
1992571..1993527
AA seq 318 aa
MTTTAPSTPGVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDVVRVPPVRVPERDEPVPLAQGLLQRLEASIVFEDKALIVINKPAGIAVHGGSG
LNFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMA
LVRGHWATAVKQVRAPLLKSNLRSGERMVEVNEEGKEALTVFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHCIAGDSKYGDDDFTREIRELGGKRLFLHAYMLTVPLPDGGELKL
QAPVDEMWAKTVERLSAP
NT seq 957 nt   +upstreamnt  +downstreamnt
atgacgactactgccccctcgactccaggcgttcaattgcttgaggtctcgccggaatat
gccggccaacgtattgataacttccttctcgcccggctcaaaggcgtgcccaagaccttg
atttaccgcattttgcgtaaaggcgaagtgcgagtgaacaaggggcggatcaagcccgag
tacaagctgcaagcgggtgatgtggtgcgcgtgcctcccgtgcgggtgcccgagcgcgat
gagccggtgccgttggctcaagggctgctgcagcgcctggaagcctcgatcgtcttcgaa
gacaaggccctgattgtgatcaacaagcctgccgggattgccgtgcatggcggcagcggc
ttgaatttcggggtgatcgaagcctttcgtcagttgcgcccggacgccaaggagctggag
ttggtgcatcgcctcgatcgggacacctccggcctgctgatgatcgcgaaaaaacgcagc
atgctgcgtcatctgcatgccgcgctgcggggcgatggcgtggacaagcgctacatggcg
ctggtccgtggccattgggccacggcggtgaagcaggtgcgtgcgccgctgctcaagagc
aacctgcgctccggcgagcgcatggtggaggtcaacgaagagggcaaggaggccttgacc
gtgttcaaggtgctgcgccgcttcggtgatttcgccaccatggtcgaggccaagccggtg
accgggcgtactcaccagattcgtgtgcacaccctgcatgccgggcactgcattgccggt
gacagcaagtacggcgatgacgatttcactcgcgagatccgtgagctgggcggcaagcgc
ctgtttctccatgcctatatgttgacggtgccgctgcccgatggcggcgagctgaaattg
caggccccggtggatgagatgtgggccaagaccgtggagcgcctgagtgcaccctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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