KEGG   Pseudomonas protegens Pf-5: PFL_1940Help
Entry
PFL_1940          CDS       T00249                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8)
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:pfl00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    PFL_1940 (fadB)
   01212 Fatty acid metabolism
    PFL_1940 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    PFL_1940 (fadB)
   00650 Butanoate metabolism
    PFL_1940 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    PFL_1940 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    PFL_1940 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    PFL_1940 (fadB)
   00310 Lysine degradation
    PFL_1940 (fadB)
   00380 Tryptophan metabolism
    PFL_1940 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    PFL_1940 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    PFL_1940 (fadB)
   00281 Geraniol degradation
    PFL_1940 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    PFL_1940 (fadB)
Enzymes [BR:pfl01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     PFL_1940 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     PFL_1940 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     PFL_1940 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     PFL_1940 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JCVI-CMR: 
UniProt: 
Position
2165628..2167775
Genome map
AA seq 715 aa AA seqDB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMAASAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPDKLKDAALALVKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQIVLAEVEGQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq 2148 nt NT seq  +upstreamnt  +downstreamnt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaattg
cgtcaggctgttgacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagc
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagtttgtcgacaacttcaagctg
ccggatgccgagctggtggcaggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgtgccaaccgttgccgcgatcaacggcatcgccctgggcggcggcctggaa
atgtgcctggcggcggactaccgcgtcatggctgccagtgccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgtgcgcctgccgcgtctgatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgctg
aaagtcggtgccgtcgacgccgtggttgctcccgacaaactcaaggacgccgctctggcc
ctggtcaagcgcgccatttccggcgagttcgactacaaggccaagcgccagcctaagctg
gaaaagctcaagctcaacgccattgagcagatgatggctttcgaaaccgccaaaggtttc
gtggccggccaggctggcccgaactacccggcaccggtcgaagcgatcaagaccattcag
aaagccgccaacttcggtcgcgacaaagccttggaagtagaggctgccggcttcgtcaaa
ctggccaagacctctgctgcgcaaagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaagcaggccgccgtactc
ggcgccggtatcatgggtggcggcatcgcctaccagtcggcctccaaaggtacgccgatc
ctgatgaaggacatcaacgaacacggcatcgagcaggggctggcggaagccgcaaaactg
ctggtgggccgtgttgacaaaggccgcatgaccgccgcgaagatggctgaagtgctcaac
ggcattcgtccgaccctgtcctacggtgacttcggcaacgtcgacctggtggttgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtactggctgaagtggaaggccaggtcaag
gaggacaccatcctggcgtccaacacctcgaccatttccatcagcctgctggccaaggct
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtgcgcatcgacaagatcatggagaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtcatggccgaaggcttc
ccggatcgcatgaaggacgatcgccgctcggccgtggacgtgctctacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaaaccgacaagaagggcaagcag
aagaaggtggccgatccgtcggtgctggaagtgctcaagccgattgtctacgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatgatcccgttgtgcctggaaaccgtt
cgttgcctggaagacggcatcgttgaaaccgctgccgaagctgacatgggcctggtctac
ggcattggtttccctccattccgtggcggtgcgctgcgctacatcgattccatcggtgtt
gccgagttcgttgccctggccgaccagtacgccgatctgggcgcgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa

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