KEGG T00249: PFL

Pseudomonas protegens Pf-5: PFL_4642

Entry

PFL_4642 CDS T00249

Gene name

tdcG

Definition

L-serine ammonia-lyase TdcG (EC:4.3.1.17)

Orthology

K01752

L-serine dehydratase [EC:4.3.1.17]

Organism

pfl Pseudomonas protegens Pf-5

Pathway

pfl00260	Glycine, serine and threonine metabolism
pfl00270	Cysteine and methionine metabolism
pfl01100	Metabolic pathways
pfl01110	Biosynthesis of secondary metabolites
pfl01230	Biosynthesis of amino acids

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:pfl00260]
Metabolism; Amino acid metabolism; Cysteine and methionine metabolism [PATH:pfl00270]

SSDB

Motif

Pfam:

SDH_alpha SDH_beta

Other DBs

NCBI-GI:

NCBI-GeneID:

JCVI-CMR:

UniProt:

Position

5358715..5360091

AA seq 458 aa
MSLSVFDLFKIGIGPSSSHTVGPMRAAARFVEGLRRDQLLASTTCVKVELYGSLGATGKG
HGSDKAVLLGLEGEHPDTVNTENIAARLQEIRSSARLNLLGEHSIAFNEKEHLAMIRKPL
AYHPNGMIFRAFDSAGLQIRSREYYSVGGGFVVDEDAAGADRIVEDTTRLTFPFRNAKEL
LQHCATYGLSISQVMLTNESAWRPEAETRAGLLKIWQVMQDCVDAGCRNEGILPGGLKVK
RRAAALHRQLCKHPEAALRDALSVLDWVNLYALAVNEENANGGRVVTAPTNGAAGIIPAV
LHYYMRFIPGANEDGVVRFLLTAAAIGILYKENASISGAEVGCQGEVGVACSMAAGALCE
VLGGSVQQVENAAEIGMEHNLGLTCDPIGGLVQVPCIERNAMGSVKAINAVRMALRGDGQ
HFVSLDKVIRTMRQTGADMKSKYKETARGGLAVNIIEC

NT seq 1377 nt +upstreamnt +downstreamnt
atgtccctgagcgtgttcgacctgttcaagattggcatcggcccctccagctcccatacc
gtcggcccgatgcgcgccgccgcgcgttttgtcgaaggcctgcgtcgcgatcaactgctg
gccagcaccacctgcgtcaaggtcgagctgtacggctcgctgggcgccaccggcaaaggc
cacggcagcgacaaggcggtgctactaggcctggaaggcgagcacccggacaccgtgaat
accgaaaacatcgccgcgcgcctgcaggaaatacgcagcagcgcgcgcctcaacctgctc
ggcgaacacagcattgcgttcaacgagaaagaacacctggccatgatccgcaagcccctg
gcctatcaccccaatggcatgatctttcgtgccttcgacagcgccggtttgcagatccgc
agccgcgagtactactccgttggcggtggtttcgtcgtggatgaagatgccgccggagcc
gatcgcatcgttgaagacaccacccgcctgaccttccctttccgcaatgccaaggaactg
ctgcaacattgcgctacctatggcctgtccatcagccaggtgatgctgaccaatgaaagt
gcctggcgcccggaagctgaaacccgcgccggactgctgaagatctggcaggtgatgcag
gactgcgtggatgccggctgccgcaacgaaggcatcctgcccggcgggctcaaggtcaag
cgccgtgccgcggccctgcaccgccagttgtgcaagcacccggaagcggcactgcgcgat
gccctgtcggtgctggactgggtcaacctctatgccctggcggtgaatgaagaaaacgcc
aacggcggacgggtggtcaccgcccccaccaatggcgcggccggaatcattccggcggtg
ctgcactactacatgcgtttcattcccggggccaacgaagacggggtggtgcgttttctc
ctcaccgccgcagccatcggcatcctctacaaggaaaacgcctcgatctccggcgccgaa
gtcggctgccagggtgaagtgggcgtggcctgctcgatggcggccggggccttgtgcgag
gtcctcggcggcagcgtgcagcaagtggagaacgccgcggaaatcggcatggaacacaac
ctcgggctgacctgtgaccccattggcgggttggtgcaggtgccctgcatcgagcgcaac
gccatgggctcggtcaaggccatcaatgcggtgcgcatggccctgcgcggcgacgggcag
cacttcgtctccctcgacaaggtcatccgcaccatgcgccagaccggcgccgacatgaaa
agcaaatacaaggaaaccgcccgtggcggtctggccgtgaacattatcgagtgctga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JCVI-CMR (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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