KEGG   Pseudomonas protegens Pf-5: PFL_5346
Entry
PFL_5346          CDS       T00249                                 
Symbol
glyA_2
Name
(GenBank) glycine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
pfl00260  Glycine, serine and threonine metabolism
pfl00460  Cyanoamino acid metabolism
pfl00630  Glyoxylate and dicarboxylate metabolism
pfl00670  One carbon pool by folate
pfl00680  Methane metabolism
pfl01100  Metabolic pathways
pfl01110  Biosynthesis of secondary metabolites
pfl01120  Microbial metabolism in diverse environments
pfl01200  Carbon metabolism
pfl01230  Biosynthesis of amino acids
pfl01240  Biosynthesis of cofactors
Module
pfl_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PFL_5346 (glyA_2)
  09102 Energy metabolism
   00680 Methane metabolism
    PFL_5346 (glyA_2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PFL_5346 (glyA_2)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PFL_5346 (glyA_2)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PFL_5346 (glyA_2)
Enzymes [BR:pfl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PFL_5346 (glyA_2)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase Aminotran_5 Cys_Met_Meta_PP DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: AAY94556
UniProt: Q4K5R9
Position
6116211..6117464
AA seq 417 aa
MFSRDLTIAKYDADLFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHAGSQANAAVYLALLQGGDTILGMS
LAHGGHLTHGAAVSSSGKLYNAIQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQI
LDFPRFREIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANADIEKKLNSAVFPGAQGGPLEHVIAAKAICFKEALQPEFKAYQEQVVKNAQAMAEV
FIARGFDVVSGGTKNHLFLLSLIKQDISGKDADAALGKAFITVNKNSVPNDPRSPFVTSG
LRFGTPAVTTRGFKEAECKELAGWICDILADLNNEAVIDAVREKVKAICKKLPVYGA
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagccgtgatttgactattgccaagtacgacgccgatctctttgccgccatggag
caagaagctcagcgccaggaagagcacattgagctgatcgcttcggaaaactacaccagc
ccagcggtgatggaagctcaaggctcggtactgaccaacaaatacgccgaaggctaccca
ggcaagcgctactacggcggttgcgaatacgtcgacgtggttgaacagctggccatcgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccacacgccggttcccag
gccaacgccgcggtctacctggccctgctgcaaggcggcgacaccatcctgggcatgagc
ctggcccacggcggtcacctgacccacggcgccgcggtgtcctcctccggcaagctgtac
aacgctatccagtacggcatcgacgccaacggcctgatcgactacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaaaatgatcgtggccggtttctccgcctactcgcagatc
ctcgacttcccgcgtttccgcgaaatcgctgacaaagtgggcgcctacctgttcgtcgac
atggcccacgtggccggtctggtcgccgctggcgtctacccgaacccggtgccattcgct
gacgtcgtgaccaccaccacccacaagaccctgcgcggtccacgtggcggcctgatcctg
gctcgcgccaacgccgacatcgagaagaagctcaactccgccgtattcccgggcgcccag
ggtggcccgctggagcacgtgatcgccgctaaagcgatctgcttcaaggaagcgctgcag
cctgagttcaaggcctaccaggaacaagtggtgaagaacgcccaggccatggccgaagtg
ttcatcgcccgcggtttcgatgtggtttccggtggtaccaagaaccacctgttcctgctg
tcgctgatcaagcaggacatctccggtaaagacgccgacgccgctctgggcaaagccttc
atcaccgtgaacaagaactccgtgccaaacgatccacgctccccgttcgtcacctccggc
ctgcgcttcggtactccggccgtgaccactcgtggcttcaaggaagccgagtgcaaggaa
ctggccggctggatctgcgacatcctggcggacctgaacaacgaagcggtgatcgacgct
gtgcgtgagaaggtcaaggccatctgcaagaagctgccggtatacggcgcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

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