KEGG   Pseudomonas protegens Pf-5: PFL_5870Help
Entry
PFL_5870          CDS       T00249                                 

Gene name
mutM
Definition
(RefSeq) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pfl00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PFL_5870 (mutM)
Enzymes [BR:pfl01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PFL_5870 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PFL_5870 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(6674588..6675400)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQKVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGLPAAKHEHVDIELESGLALRYTDPRRFGAMLWSHD
PLNHELLVRLGPEPLTDLFDGERLYQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAKGISRARYLKLAIEIKRILAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGENCKVCGTGLREIKLGQRASVYCPRCQS
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattaccggaagtcgaaaccacccggcgcggaatcgcgccgcatctggaaggc
cagaaggtcagccgggtcatcgtccgtgaccggcgcttgcgctggccgatccccgaagat
ctggacgtgcgcttgtccgggcagcgcattgtgctggtggagcggcgggccaaatacctt
ttgatcaatgccgaagtcggcaccctgatcagccacctgggcatgtccggcaacctgcgt
ctggtggaggttgggctgccggcggccaagcacgaacatgtggatatcgagctggagtcc
ggcctggccctgcgctacaccgatccgcggcgctttggcgccatgctctggagccacgac
ccgctgaatcacgaattgctggtgcgcctggggcccgagccgctgaccgacctgttcgac
ggcgagcgcctgtatcagctgtcccgcggacgctccatggcggtcaagccgttcatcatg
gacaacgcagtggtggtgggggtgggcaatatctatgcgaccgaggcgctgttcgccgcg
ggcatcgacccgcgccgcgaagccaaggggatttcccgagcgcgctacctgaagctggcg
atcgagatcaaacgcatcctggcggccgccatcgagcgcggcggcaccaccttgcgcgac
tttatcggtggcgatggccagccgggctacttccagcaggaactgttcgtctacgggcgt
ggcggggagaactgcaaggtctgcggcaccgggctgcgggaaatcaagctgggccagcgg
gccagtgtctattgcccgcgttgccagagctga

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