KEGG   Pseudomonas fluorescens UK4: HZ99_17940
Entry
HZ99_17940        CDS       T03319                                 
Name
(GenBank) tRNA threonylcarbamoyladenosine biosynthesis protein RimN
  KO
K07566  L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
Organism
pfn  Pseudomonas fluorescens UK4
Brite
KEGG Orthology (KO) [BR:pfn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfn03009]
    HZ99_17940
   03016 Transfer RNA biogenesis [BR:pfn03016]
    HZ99_17940
Enzymes [BR:pfn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.87  L-threonylcarbamoyladenylate synthase
     HZ99_17940
Ribosome biogenesis [BR:pfn03009]
 Prokaryotic type
  Other maturation factors
   HZ99_17940
Transfer RNA biogenesis [BR:pfn03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    HZ99_17940
 Prokaryotic type
    HZ99_17940
SSDB
Motif
Pfam: Sua5_yciO_yrdC
Other DBs
NCBI-ProteinID: AIG03967
UniProt: A0A379I5A3
Position
3904009..3904566
AA seq 185 aa
MVNRWRVQEAAREVRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKGRSVDKGLILVAD
NIRQFDFLFEDFPDTWIDRMASTWPGPNTWLVPHQDLLPEWITGKHDTVALRVSDHPLVR
DLCSLVGPLISTSANPQGRPAARTRIRVEQYFRGQVDCVLGGSLGGRKNPSLIRDLATGE
VRRPS
NT seq 558 nt   +upstreamnt  +downstreamnt
atggtcaacaggtggcgtgtgcaagaagccgcacgagaagttcgcgcaggcgcggtgatt
gcctatccgaccgaggccgtgtggggcctgggctgcgacccgtggaacgaggaggcggtg
gatcgcttgctggcgatcaagggccgttcggtggacaaaggcttgatcctggtcgccgac
aatatccggcaattcgactttcttttcgaagacttccccgacacctggatcgaccgcatg
gccagcacctggccggggcccaatacctggctggtgccccaccaggatctgctgcctgaa
tggattaccggtaagcacgacaccgtggcactgcgggtcagcgatcatccactggtgcgg
gatttgtgttcattggtggggccgttgatctccacctcggccaaccctcagggccggcca
gcggcgcgcacgcggatccgggtggagcagtatttccgtgggcaggtggattgtgtgttg
ggcggcagcctgggcgggcgcaagaaccctagcttgattcgggatctggcgactggcgag
gttcgtcgcccgtcctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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