KEGG   Pseudomonas fluorescens Pf0-1: Pfl01_2045
Entry
Pfl01_2045        CDS       T00283                                 
Symbol
hcpA
Name
(GenBank) putative secreted protein Hcp
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pfo  Pseudomonas fluorescens Pf0-1
Pathway
pfo02025  Biofilm formation - Pseudomonas aeruginosa
pfo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pfo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pfl01_2045 (hcpA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    Pfl01_2045 (hcpA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pfo02044]
    Pfl01_2045 (hcpA)
Secretion system [BR:pfo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pfl01_2045 (hcpA)
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: ABA73788
UniProt: Q3KEL8
Position
complement(2330996..2331511)
AA seq 171 aa
MATPAYMSVTGEKQGLITAGAFTADSVGNTYQEGHEDQVMVQAFSHDVIIPRDPQSGQPT
GQRVHKPVIITKVYDKASPLLQAALTSGERMSEIVIQWYRTSAQGTQEHYYTTKLEDAII
VAINNKMHNCQDPGNSHFTHLEEVQFTYRKITWTHEVSGTSGSDDWRAPVV
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcaacaccagcgtacatgtcggttaccggcgaaaaacaaggcctgatcactgccggc
gctttcaccgccgactccgttggcaacacctaccaggaaggtcacgaagaccaggtcatg
gttcaggcgttcagccacgacgtgatcatcccgcgtgacccgcaatccggtcagccaacc
ggtcagcgcgttcacaagccagtgatcatcaccaaggtctacgacaaggcttcgcctctg
ctgcaagccgctctgacctccggcgagcgcatgagcgaaatcgttatccagtggtaccgc
acttcggctcaaggtacccaagagcactactacaccaccaaactggaagacgcgatcatc
gtcgccatcaacaacaaaatgcacaactgccaggatccaggcaactcgcacttcacccac
ctggaagaagtgcagttcacctaccgcaaaatcacctggacccacgaagtatccggtact
tcgggttccgatgactggcgtgctccagtcgtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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