KEGG P.fluorescens_PfO1: Pfl01

Pseudomonas fluorescens Pf0-1: Pfl01_5208

Entry

Pfl01_5208 CDS P.fluorescens_PfO1

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway pfo00260 Glycine, serine and threonine metabolism
pfo00460 Cyanoamino acid metabolism
pfo00670 One carbon pool by folate
pfo00680 Methane metabolism
pfo01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:pfo00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:pfo00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:pfo00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:pfo00670]

SSDB

Motif Pfam: SHMT Aminotran_1_2 Cys_Met_Meta_PP Beta_elim_lyase
DegT_DnrJ_EryC1 Aminotran_5
PROSITE: SHMT

Other DBs NCBI-GI: 77461429
NCBI-GeneID: 3716531
JGI: Pfl5208
UniProt: Q3K5K9

Position complement(5856964..5858217)

AA seq 417 aa
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVECKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAS
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVTLAGWICDILDNLGDADVEANVAQQVSALCADFPVYR

NT seq 1254 nt +upstreamnt +downstreamnt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aaacgcgtcatgcaagcgcaaggcagcggcctgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtcgacaaggtcgaagccctggccatcgaa
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtgtacctggccctgctgcaagcgggcgacaccattctcggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaggtctcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccaaaaccggcctgatcgattacgacgaagtcgag
cgtctggctgtcgagtgcaagccgaagatgatcgtcgctggtttctcggcctactcgaaa
accctcgacttcccgcgcttccgtcagatcgccgacaaggttggcgcgctgctgttcgtc
gatatggcccacgtcgccggtctggtggctgccggtctgtacccgaacccgctgccgtac
gccgacgtggtcaccaccacgacccacaagaccctgcgcggtccacgtggcggcctgatc
ctggccaaggccaacgaagaaatcgagaagaagctcaacgcggcggtattccccggcgcc
cagggcggcccgctgatgcacgttatcgccggcaaggccgtgtgcttcaaggaagcgctg
gagcccggcttcaaggcctatcagcaacaagtgatcgacaacgcccaggcgatggcgagc
gtctttatcaaacgtggctacgatgtagtgtccggcggcaccgacaaccacctgttcctg
gtcagcctgatccgtcagggccttaccggtaaggacgccgacgccgccctcggtcgcgcg
cacatcaccgtcaacaagaacgccgtaccgaacgacccgcagtcgccgttcgtcacctcc
ggcctgcgcatcggcaccccggcggtgaccacccgcggcttcaaggtgacccagtgcgtg
acgctggccggctggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaggcc
aacgtcgcccagcaggtttcggccctgtgcgctgacttcccggtttatcgctga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-PFO (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (6)   
   PROSITE (1)   
All databases (23)

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