KEGG   Pseudomonas fluorescens Pf0-1: Pfl01_5351Help
Entry
Pfl01_5351        CDS       T00283                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pfo  Pseudomonas fluorescens Pf0-1
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pfo00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Pfl01_5351
Enzymes [BR:pfo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Pfl01_5351
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Pfl01_5351
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(6009905..6010717)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLEGQRVSRVIVRDRRLRWPIPEDLDVRLSGQRIVLVERRAKYL
LINAEVGTLISHLGMSGNLRLVEVGMPAAKHEHVDIELESGLALRYTDPRRFGAMLWSND
PLNHELLIRLGPEPLTDLFDGERLYQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRREAKGISRARYLKLAIEIKRILAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGR
GGEHCKVCGTGLREMKLGQRASVWCPRCQS
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactgccggaagtcgaaaccacccgtcgcggtattgctccgcacctggagggc
cagcgcgtcagccgggtgatcgtgcgtgaccggcggctgcgctggccgattcccgaagac
ctcgatgtgcgcctgtccgggcaacgcatcgtgctggttgagcggcgcgccaagtatctg
ctgatcaacgccgaagtcggcacgctgatcagccacttgggcatgtcgggcaaccttcgg
ctggttgaggtcgggatgccggcggccaagcatgagcatgtcgatatcgaactggagtcg
ggcctggccctgcgctacaccgatccacggcgcttcggggcgatgctctggagcaacgac
ccgctcaatcacgagttgctgatccgcctgggtccggagccgttgaccgatctgttcgat
ggcgagcggttgtatcagctgtcacgcgggcgctcgatggcggtcaagccgttcatcatg
gacaacgcggtggtggtgggggtcggcaatatctacgcgaccgaggcgctgttcgccgcc
ggtatcgatccgcggcgagaggccaagggcatttcccgggcgcgctatctgaagctggcg
atcgagatcaaacgcatcctcgctgcggccattgagcgcggcggcaccacgttgcgcgac
ttcattggtggcgacgggcagccggggtatttccagcaggagctgtttgtctacggtcgc
ggtggcgagcactgcaaggtctgcggtacgggcctgcgggaaatgaagctcggccagcgc
gccagcgtctggtgtccgcgctgccaaagctga

DBGET integrated database retrieval system