KEGG   Pseudozyma flocculosa: PFL1_01099
Entry
PFL1_01099        CDS       T03141                                 
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pfp  Pseudozyma flocculosa
Pathway
pfp03030  DNA replication
pfp03410  Base excision repair
pfp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFL1_01099
   03410 Base excision repair
    PFL1_01099
   03420 Nucleotide excision repair
    PFL1_01099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfp03032]
    PFL1_01099
   03400 DNA repair and recombination proteins [BR:pfp03400]
    PFL1_01099
Enzymes [BR:pfp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PFL1_01099
DNA replication proteins [BR:pfp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    PFL1_01099
DNA repair and recombination proteins [BR:pfp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      PFL1_01099
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 19315227
NCBI-ProteinID: XP_007876790
Position
Unknown
AA seq 2328 aa
MSRTFGLTSSRGGASNTRSRGTFRKRGGGSGSLYRNPKEQAVAAASAQLTKGIDDGSAVE
ERFQEVKDRDEIDEKLGFSRIEEGQTRQAWLVNMHPTLVRDPDHSTGRSGVDFYFIQDDA
SMFKATVLFQPYFLVGCRAGTESVVEEWARRRYEGLIQSIERVRKEDLKLPNHLVGNQRL
YLKLNFLNVNDLLAVRRELLPLAQEAQKKLSAVDTYADVLNAAATAAAAVEIEMDDDSMG
GASYAPGEDGWTGGPKKRSGHQGLEASECINDIREYDVPYHLRLAIDKGIRVGFWYDVSF
AAGVVKLTHVPERIKRADPVVMAFDIETTKQPLKFPDAETDVIMMISYMIDGQGYLITNR
EIVSEDIDDFEYTPKAEYEGPFLIFNEADEYALLQRFFQHFREAHPTVVATYNGDSFDFP
FIDARASAHGLSMLSEIGFAIDAEKEYKSRACAHLDCFRWVKRDSYLPQGSQGLKAVTVA
KLGYDPMELDPELMTPYAIEQPQTLAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLNPD
EVLRKGSGTLCETLLMIQAYEGNIVMPNRHTDPVGNTYKGHLLESETYVGGHVEALEAGV
FRSDIETDFKVEPEAVQKLIDDLDAALKFSIVEEGRLSLDDITNYDEVKAEIQRMLEVMR
DAPLRKDPPLIYHLDVAAMYPNIMLSNRLQPDSVVSEAMCATCDYNRPGMKCDRRMNWAW
RGEYFPAKRDEVNMIKNALSSETFPPKFAGGPRRTFDDLGQAERTALLHKRLGDYSRKVY
KKTHESKTVVREAVICQRENPFYINTVRDFRDRRYEYKGLHKTWKKNLDQAASLNETVEA
KKMIVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVTCLTGATIIQLAKDLVDRIG
RPLELDTDGIWCMLPGVFPENFEFRCRNGKKFGISYPCTMLNHLVHEKFTNHQYHDLVDK
ESGRYEVRSENSIFFELDGPYRAMILPSSKEEDKLLKKRYAVFNHDGSLAELKGFEVKRR
GELQLIKDFQKQIFEKFLLGTTLDECYAAVAKVANQWLDVLYSKGSTLHDEELIDLIAEN
KSMSKTLQEYGAQKSTAITTAKRLAEFLGAQMIKDKGLACKFIVSAKPFGAPVTERAVPV
AIFNAETSVKHHYLKKFLKDNSITDFDLRSILDWDYYIERFGGVIQKLITIPAAMQKVIN
PVPRVRHPDWLFKRVAAKEDKFKQKKLTDVFKPAKPGLATVRAGSDKPITEVQAEVIEEA
ADGSPVAIAAPADVRPIPVAEIEPEPPLPDMDDDYPGWVAAMKVRWRKRRQQRARERKEL
ASMGGGLSAGSRAAGKGAVGSLFSRRSMSMATATWDVVQICPTNRPGEFRLWISIDQHLQ
SLKLRVPRQFYVNFKQMPRAGTFADSYRVESLVRTLPRGAPCRHLFRITVPEDVYLEEEA
HFSALLNHANVDGIYEMRVPLEVRALIQLGSTCTMNRSGGAGQNKLSRALDAGFELADLV
SPSSVDLLRHRYLGGGRNLRYFYLYHANRDGRHVFGLFTPEGQLKVHIVDSAGLRQLPNL
ETMYADRVAHMRKKGKLPEGAGVFEYGDALDVEVKVHTTEARAFRALGRDLTTLRTAKQG
SAMLAICTSKDQQYYEAKMSQVAELPIITIPAARLEDELPALGWQLYSARRMFNCYFRTS
LWISRWIELATHFDVPLCNVERDFAVFGSDIDFARRLVKQDMVLWWSDNPQPDLGGREQD
INALQRWDEREGLEISHAGCFSNVCLEVALTDLAVDAVLQSGSVNEMEGSGAGSMAFDTS
SHNLDEYSRGTVESSTVLGDSVLTSQVFTAVKAMVKAWHVDKARGRSPYSSLLSDNFWRW
ASNSTSAMFEPALQRFLHDLMKKTLLQLLAEFKRLGASIVYASFNRLFLLTNKPTAGSAA
AYARYLMSAVTSRELFKHIRLDLVHYWEYLLWMDTANFGGVCADPESPEELPASFSVEMN
WNIQTFLPPALQERFSNAVGSFIFQLYENKRRAHTDGLLDRTPLKQIQNPPAANGDGGGG
GSGSGNGNGNGGEAELPSSTALQPVDPVKARESKFSKDLINHNMTRKLLRVVEEVKKDMA
RGTAEISAATAAEEDDEYIDMLSTQHKARWSFPELPGASHVKMTSPLLEFVKSVTAVLAL
SKEHAVEAQVCKRNLLDLIGVREFSTEAEWRNPCEPFRLPLVICQFCNDDRTLDLCRDAD
LMPSEPGKRREWRCSKCSFPYDRTAIETRLVDIAHGYIASFTLQDLRCNRCGVLKDDSLQ
PHCDCSGSYGLMVTRKETVRKLRNLQAIASFHALDLLRGAVEALLVAV
NT seq 6987 nt   +upstreamnt  +downstreamnt
atgtcccgcacctttggactcacgtcgtcgagaggcggagccagcaacacacgaagcaga
ggcacattccggaaacgcggcggcgggtccgggtcgttgtaccgcaacccaaaggagcag
gccgtcgccgccgcatcggcgcagctcaccaagggcatcgacgatggctcggccgtcgag
gagcgcttccaggaggtcaaagaccgggacgagatcgacgagaagctcggcttctcccgg
atagaggaggggcaaacgaggcaggcctggctcgtcaacatgcacccgacgctggtccgc
gacccggaccacagcacgggccggagcggcgtcgacttctactttatccaggacgacgcc
agcatgttcaaggccaccgtcctcttccagccctactttctcgtcggctgccgcgccggc
accgagtcggtcgtcgaggagtgggcgcggagacggtacgagggtctgatccagtccatc
gagcgcgtccgcaaggaggacctcaagctgcccaaccacctcgtcggcaaccagcggctc
tacctcaagctcaacttcctcaacgtcaacgacctcctcgccgtgcgcagggaactgctg
ccgcttgcgcaggaggcgcagaagaagctgtcggccgttgacacgtatgccgacgtgctc
aacgccgccgccaccgccgcggcggcggtcgagatcgagatggacgacgacagcatgggc
ggcgccagctatgcgcccggcgaggacggctggaccggcgggcccaagaagcgcagcggc
caccaggggctcgaggcgtccgagtgcatcaacgacatccgcgagtacgacgtgccctac
cacctccgcctggccatcgacaagggtatccgcgtcggcttctggtacgatgtcagcttc
gccgccggcgtcgtcaagctcacccacgtgcccgagcgcatcaagcgtgccgaccccgtc
gtcatggccttcgacatcgagacgaccaagcagccgctcaagttccccgacgccgagacc
gacgtcatcatgatgatctcgtacatgatcgacggccagggctacctgatcaccaaccgc
gagattgtcagcgaggacatcgacgactttgagtatacgcccaaggccgagtacgaggga
ccctttctcatcttcaacgaggccgacgagtacgcgctgctacagcgctttttccagcac
ttccgcgaggcgcacccgaccgtcgtggccacctacaacggcgactcgttcgacttcccc
tttatcgatgcgagggcgtcggcgcacggcttgtcgatgctgagcgagatcgggttcgcc
atcgacgccgaaaaggagtacaagtcgcgcgcctgcgcccacctcgactgcttccgctgg
gtcaagcgcgactcgtacctcccgcagggcagccagggcctcaaggccgtcaccgtcgcc
aagctgggctacgacccgatggagctggacccggagttaatgacgccctacgccatcgag
cagccgcagacgctggcccagtactcggtctcggacgccgtcgccacctactacctctac
atgaagtacgttcacccgttcatcttcagtctttgcaacatcatcccgctcaacccggac
gaggtgctgcgcaagggctccggcacgctgtgcgagacgctgctgatgatccaagcctac
gagggcaacatcgtcatgcccaaccgccacacggacccggtgggcaacacgtacaagggc
cacctgctcgagtccgagacgtacgtcggcggccacgtcgaggcgctcgaggccggcgtc
ttccgcagcgacatcgagaccgacttcaaggtggagcccgaggcggtgcagaagctgatc
gacgacctggacgcggcgctcaagttcagcatcgtcgaagagggccggctgtcgctcgac
gacatcaccaactacgacgaggtcaaggccgagatccagcgcatgctcgaggtgatgcgc
gacgcgccgctgcgcaaggacccgccgctcatctaccacctcgacgtggcggccatgtac
cccaacatcatgctttccaaccggctgcagccggactcggtcgtcagcgaggccatgtgc
gccacgtgcgactacaaccggcccggcatgaagtgcgatcggcggatgaactgggcgtgg
cgtggcgagtacttccccgccaagcgcgacgaggtcaacatgatcaagaacgccctgtcg
agcgagacgttcccgcccaagtttgccggcggcccgcgcaggacgttcgacgacctcggc
caggcggagcggacggcgctgctgcacaagcggctcggcgactacagccgcaaggtctac
aagaagacgcacgagtccaagacggtcgtccgcgaggccgtcatctgccagcgcgagaat
ccattctacatcaacacggtgcgcgacttccgcgaccgccggtacgagtacaaggggctg
cacaagacgtggaaaaagaacctcgaccaggccgcgtcgctcaacgagaccgtcgaggcc
aagaagatgatcgtcctctacgactcgctgcagctggcgcacaagtgcatcctcaactcg
ttctacggctacgtcatgcgcaagggcgcgcgctggtactcgatggagatggccggtgtc
acctgcctcacgggcgccaccatcatccagctggcaaaggacctcgtcgaccgcatcggt
cgcccgctcgagctcgacaccgacggcatctggtgcatgctgcccggcgtgttcccggag
aacttcgaattccggtgccgcaacggcaagaaattcggcatctcgtatccgtgcaccatg
ctcaaccacctggtgcacgaaaagttcaccaaccaccagtaccacgacctcgtcgacaag
gagagcggccggtacgaggtgcgcagcgagaactcgatctttttcgagctcgacgggccg
taccgcgccatgatcctgccctcgagcaaggaggaggacaagctgctcaagaagcgctac
gccgtcttcaaccacgacggctcgctcgccgagctcaagggcttcgaggtcaagcgccgc
ggcgagctgcagctgatcaaggatttccagaagcagatctttgaaaagttcctgctcggc
accacgctcgacgagtgctacgccgccgtcgccaaggtggccaaccagtggctcgacgtc
ctctacagcaagggctcgacgctccacgacgaggagctcatcgacctcatcgccgagaac
aagagcatgtccaagacgctgcaggagtacggcgcgcagaagtcgacggccatcacgacg
gccaagcggctggccgagttcctcggcgcccagatgatcaaggacaagggcctggcgtgc
aagttcatcgtgtcggccaagcccttcggcgcccccgtcactgagcgcgccgtgcccgtc
gccatcttcaacgccgagaccagcgtcaagcaccactacctcaagaagttcctcaaggac
aacagcatcaccgactttgacctgcgcagcatcctcgactgggactactacatcgagcgc
ttcggcggcgtcatccagaagctcatcaccatccccgccgccatgcagaaggtcatcaac
ccggtgccgcgcgtccggcacccggactggctcttcaagcgcgtcgccgccaaggaggac
aagttcaaacagaagaagctcaccgacgtcttcaagccggccaagcccgggctcgccacc
gtccgagccggcagcgacaagccgatcaccgaggtccaggccgaggtgatcgaggaggcg
gccgacggcagccccgtggcgatcgccgcaccggccgacgtgcgtcccatccccgtggcc
gagatcgagccagagccgccgctgccggacatggacgacgattatcccggatgggtcgcc
gcgatgaaggtcaggtggcgcaagcgccggcagcagcgcgcccgggagcgcaaggagctg
gccagcatgggcggcggcctctctgcgggctcgcgcgcggccggcaagggcgcggtcggc
tcgctgttttcgcgccggtcgatgagcatggccaccgccacctgggacgtggtgcagatc
tgcccgaccaaccgaccgggcgagttccgcctgtggatctcgatcgaccagcacctgcag
agcctcaagctccgcgtcccgcgccagttctatgtcaacttcaagcagatgccccgcgcc
ggcacgtttgccgacagctaccgcgtcgagagcctggtccgcacgctgcctcgcggcgcg
ccctgccgccaccttttccgcatcacggtgcccgaagacgtctacctcgaggaggaggcg
cacttctccgccctcctcaaccacgctaacgtcgacggcatctacgagatgcgcgtgccc
ctcgaggtgcgggcgctcatccagctcggctcgacctgcaccatgaaccgcagcggcggc
gcgggccagaacaagctcagccgcgccctcgacgccggcttcgagctggccgatctggtc
agccccagctcggtcgatctgctgcgccaccgctacctcggcgggggccgcaacctgcgc
tacttttacctctaccatgccaaccgcgacgggcgccacgtcttcggcctcttcacgccc
gagggccagctcaaggtgcacattgtcgactcggccggcctgcgccagctgcccaacctc
gagaccatgtacgccgaccgcgtcgcccacatgcgcaagaagggcaagctgcccgaggga
gcgggcgtcttcgagtacggcgatgcgctcgacgtcgaggtcaaggtgcacacgaccgag
gcgcgcgccttccgcgcgctcgggcgggatctgaccacgctgcgcacggccaagcagggc
tcggcgatgctggccatctgcacgtccaaggaccagcagtactacgaggccaagatgagc
caggtggccgagctgccgatcatcacgatcccggcggcccgcctcgaagacgaactgccg
gcgctcggctggcagctctacagcgcgcgccggatgttcaactgctacttccgcacgtcg
ctctggatcagccgctggatcgagctggcgacccactttgacgtgccgctgtgcaacgtc
gagcgcgactttgccgtgtttggcagcgacattgactttgcccggcggctggtcaagcag
gacatggtgctctggtggtccgacaacccgcagccggacctcggcgggcgcgagcaggac
atcaacgcgctgcagcggtgggacgagcgcgagggcctcgagatctcgcacgccggctgc
ttttccaacgtctgcctcgaggtggcgctgacggacctggcggtcgacgccgtgctgcag
tcgggctcggtcaacgagatggagggcagcggtgccggatcgatggcgttcgacacctcg
tcgcacaacctcgacgagtacagccgcggcacggtcgagtcgtcgacggtgctgggcgac
tcggtgctgacgtcgcaggtcttcaccgccgtcaaggccatggtcaaggcgtggcacgtc
gacaaggcgcgcggccgctctccctacagctcgctgctgtcggacaacttctggcgctgg
gcgtccaacagcacctcggccatgtttgagccggcgctgcagcgcttccttcacgacctg
atgaagaagacgcttctgcagctgctggccgagttcaagcggctcggcgccagcatcgtc
tatgccagcttcaaccgcctcttcctgctgaccaacaagccgaccgccggcagcgccgcc
gcctacgcgcgctacctgatgagcgccgtgacgagccgcgagctgttcaagcacatccgc
ctcgacctggtccactactgggagtacctgctatggatggacacggccaactttggcggt
gtctgcgcggaccccgagagccccgaggagctgccggcgtcgttcagcgtcgagatgaac
tggaacatccagacgttcctgccgccggcgctgcaggagcgcttcagcaatgccgtcggc
agcttcatcttccagctgtacgaaaacaagcggcgcgcccacaccgacggcctgctggac
cgcacgccgctcaagcagatccaaaatcctcccgcggccaacggcgacggcggcggcggc
ggcagcggcagcggtaacggcaacggcaacggcggcgaggccgagctgccgagctcgact
gccctgcagccggtggatccggtcaaggcgagggagtccaagttctccaaggatctaatc
aaccacaacatgacgcgcaagctgctgcgggtggtcgaggaggtcaagaaggacatggcg
cgcggcacggccgagatcagtgcggccacggcggccgaggaggacgacgagtacatcgac
atgctctcgacgcagcacaaggcgcggtggagcttcccggagctgccgggtgcgagccac
gtcaagatgacgtcgccgctgctcgagtttgtcaagagcgtgacggcggtgctggcgctg
tccaaggagcacgccgtcgaggcgcaggtgtgcaagcgcaacctgctcgacctgatcggg
gtgcgcgagttcagcaccgaggcagagtggcgcaacccgtgcgagccgttccggctgccg
ctcgtcatctgccagttttgcaacgacgatcgcaccctcgacctgtgccgtgacgccgac
ctgatgccgtcggagccgggcaagcggcgcgagtggcggtgcagcaagtgctcgtttccc
tacgaccgcaccgccatcgagacgcggctggtcgacatcgcccacggctacattgcctcg
ttcacgctccaggacctgcggtgcaaccggtgtggcgtgctcaaggacgactcgctgcag
ccccactgcgactgctcgggcagctacggcctcatggtgacgcgcaaggagacggtgcgc
aagctcaggaacctccaggccattgcgtcgttccacgccctcgatctgctccgcggcgcc
gtcgaggcgctcctcgtcgccgtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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