KEGG   Propionibacterium freudenreichii subsp. freudenreichii DSM 20271: RM25_1455
Entry
RM25_1455         CDS       T03860                                 
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pfre  Propionibacterium freudenreichii subsp. freudenreichii DSM 20271
Pathway
pfre03030  DNA replication
pfre03410  Base excision repair
pfre03420  Nucleotide excision repair
pfre03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RM25_1455
   03410 Base excision repair
    RM25_1455
   03420 Nucleotide excision repair
    RM25_1455
   03440 Homologous recombination
    RM25_1455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfre03032]
    RM25_1455
   03400 DNA repair and recombination proteins [BR:pfre03400]
    RM25_1455
Enzymes [BR:pfre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RM25_1455
DNA replication proteins [BR:pfre03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     RM25_1455
DNA repair and recombination proteins [BR:pfre03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     RM25_1455
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RM25_1455
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_pol_lambd_f HHH_5 HHH IMS_HHH RecR_HhH
Other DBs
NCBI-ProteinID: AJQ91165
Position
complement(1652767..1655445)
AA seq 892 aa
MTETARLLVIDGHSMAFRAFYALPVENFSTSTGQYTNAVYGFTSMLINLLRNEEPTHLGV
AFDVSRRTFRTDIYEDYKGTRAKTPEEFSGQIGLIKQVLDAMGIAHAELEGFEGDDIVAT
WSAQADAKGWENLIVSGDRDSFQLVDDNTTVLYPKKGVSELSRMTPEAVEAKYGVSPTHY
PELAALVGDTSDNLTGVPGVGPKTAAKWLAKYGDLANLLDHADEIKGKVGDSLRAHLDDV
KRNRELNRELTDLKLPVDVEGLARAEINREAVHEVFDVLQFRTLRDRLFSVFPEAGETKG
EEGFELEVTRPEPGRLGDWFAAHRSDDPIGVEATGHWGAGTGDIDTLAFATTSDDAACVD
VPELTPDDEKALAAWLTDPQATKAMHGAKGPLLALWARQLDLAGLDSDTQLAAYLLRPDQ
RSYDLDDLALRHLGRELRVQDSEQVNQETLDFGSERQPAETAMLRARAIAELAGVLDGEL
DDTSQRGLLHSLEMPLERVLARMEQRGVAIDMDVLDQLRSEYDARVQAAEQASFAAIGTQ
INLGSPKQLQAVLFDQLDMPKTKRTKSGYTTDADALEKLYQKTRHPFLEHLLAYRDTIKL
RQIIDTLIKSTSDDGRIHTTYVQTVAGTGRLSSTDPNLQNIPIRTPEGRRIRDAFVPGEG
FEGLMSADYSQIEMRVMAAASGDKTLIHAFASGADFHSMTASHVFDVPVEQVTPAQRSSV
KQMNYGLAYGLSAYGLSSRLNVSVPEARALMDQYFQTFGPVRDYLDSLVEKARKQGYTET
MLGRRRYLPDLNSSNRQRRQMAERMALNAPMQGTAADIIKTAMLQVEQELSASGLRSRML
LQIHDELVLEVAAGERDRVQQIVGDKMKHAIELTVPLDVSFGYGRSWNAAAH
NT seq 2679 nt   +upstreamnt  +downstreamnt
gtgactgagactgcgcgactgctggtgatcgacggccattcgatggccttccgggcgttc
tatgcgttgcccgtggagaacttctccacctccaccgggcagtacacgaacgccgtctac
ggcttcacgtcgatgctcatcaacctgctgcgcaacgaggaaccgacgcatctgggcgtg
gccttcgacgtctcacgacgcaccttccgcaccgacatctacgaggactacaagggcacc
cgcgcgaagacccccgaggagttctccggccagatcgggctgatcaagcaggtgctggac
gcgatgggcatcgcccacgccgagctcgagggtttcgagggcgacgacatcgtcgccacc
tggtcggcccaggccgacgcgaagggctgggagaacctgatcgtgtcgggggaccgcgac
agcttccagctggtcgacgacaacaccacggtgctctatccgaagaagggcgtctccgag
ttgtcacgcatgacgcccgaggccgtcgaggccaagtacggcgtcagccccacccattat
ccggagctggccgcactggtcggcgacaccagtgacaacctcaccggcgtgcccggggtc
ggccccaagacggccgccaagtggttggcgaagtacggcgacctggcgaacctgctcgac
cacgccgacgagatcaagggcaaggtgggcgacagcctgcgggcgcacctcgacgatgtg
aagcgcaaccgcgagctcaaccgggaactgaccgacctcaagctgcccgtcgacgtcgag
ggcctggcgcgggccgagatcaatcgcgaggccgtccacgaggtcttcgacgtcctgcag
ttccgcaccctgcgcgaccgcctgttcagcgtcttccccgaggcgggggagaccaagggt
gaggagggcttcgagctcgaggtcacccgtccggagccgggcaggctcggtgattggttc
gcggcccatcgcagcgacgacccgatcggcgtggaggccaccgggcactggggcgccgga
accggggacatcgacacgctggccttcgcgacgaccagcgatgacgccgcatgcgtcgac
gtgcccgaactgacccccgacgacgagaaggccctggcggcgtggctcaccgacccgcag
gcgaccaaggccatgcacggcgccaagggtccactgttggccctgtgggcacgccagctc
gaccttgcgggactggacagcgacacccaattggccgcctacctgctgcgtcccgaccag
cgcagctacgacctggacgaccttgccctgcgccatctgggacgcgagctgcgggtccag
gattccgagcaggtgaaccaggagaccctcgacttcgggtccgaacgccaacccgccgag
accgccatgttgcgggcacgcgccatcgcggagctggccggggtgctcgacggcgagctc
gacgacaccagccagcgcggcctgctgcacagcctcgagatgccgctggaacgtgtgctg
gcgcgcatggagcagcggggcgtggccatcgacatggacgtgctcgaccagctgcgcagc
gaatatgacgcgcgcgtgcaggccgctgagcaggcatcgttcgcggccattggcacccag
atcaacctcggctcgcccaagcagctgcaggcggtgctgttcgaccagctcgacatgccg
aagaccaagcgcaccaagtcgggttacaccaccgacgccgacgccctggagaagctgtac
cagaagaccaggcatcccttcctcgagcacctgctggcctatcgcgacaccatcaagttg
cgccagatcatcgacaccctcatcaagtcgaccagcgatgacgggcgcatccacaccacc
tatgtgcagaccgtggcgggcaccggccgcctgtcgagcaccgaccccaacctgcagaac
atccccatccgcacccccgagggacgccgcatccgcgatgccttcgtgcccggcgagggc
ttcgagggcctgatgagcgccgactactcccaaatcgagatgcgggtgatggcggcggcc
tccggcgacaagacgctgatccatgccttcgcatcgggtgccgacttccactcgatgact
gcctcgcatgtcttcgacgtgcccgtcgagcaggtgacgccggcccagcgctccagcgtg
aagcagatgaactacgggctcgcctacggcctgtcggcctacgggctgtccagccggttg
aacgtctcggtgcccgaggcgcgggcattgatggaccagtacttccagaccttcgggccc
gtgcgcgactatctcgacagcctcgtggagaaggcccgcaagcagggctacaccgagacc
atgctgggcaggcgtcgctatctgcccgacctgaactcgtcgaaccgccaacgtcgccag
atggcggagcgcatggccctcaacgccccgatgcagggcaccgcggctgacatcatcaag
accgccatgctccaggtcgagcaggaactgtcggcctcgggcctcaggagccgcatgctg
ctgcagatccatgacgagctggtgctcgaggtggcggcgggggagcgcgaccgcgtgcaa
cagatcgtcggcgacaagatgaagcatgcgatcgagttgacggtgcccctcgacgtgtcc
ttcggctatggccgcagctggaacgccgcagcccactga

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