KEGG T00899: PFLU1820

Pseudomonas fluorescens SBW25: PFLU1820

Entry

PFLU1820 CDS T00899

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

pfs Pseudomonas fluorescens SBW25

Pathway

pfs00020	Citrate cycle (TCA cycle)
pfs00310	Lysine degradation
pfs00380	Tryptophan metabolism
pfs01100	Metabolic pathways
pfs01110	Biosynthesis of secondary metabolites
pfs01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pfs00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pfs00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pfs00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

229589337

NCBI-GeneID:

7822158

UniProt:

C3K6M7

Position

1984295..1987126

AA seq 943 aa
MQESVMQRMWNSGYLSGGNAAYVEELYELYLHDPNAVPEEWRTKFQTLSSDGNAATDVSH
ATIRDQFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGAEFTHIT
DSEQRHWFQHRLEGVRGRPVLSADVRSHLLERVTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTTGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDTTGEKVLPISI
HGDAAFAGQGVVLETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDARSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPSGTQPLMY
QQISKQRTTRELYAESLTKAGVLDDARVQAKIDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTSFDLKTLQELSAKLLEIPDGFVVQRQVSKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYIPLQNLYEGQPRF
DLYDSFLSEEAVLAFEYGYSTTTPQALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LVVLTPKSLLRHKLAISTLEDLADGSFQTVIPEIDTLDAAKVTRLVLCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLMEAIAPYTNLTHVVWCQEEPMNQGAWYSSQHHLRRS
IGNHNKALGLEYAGRDASAAPACGYASMHAEQQEKLLQDAFTV

NT seq 2832 nt +upstreamnt +downstreamnt
atgcaagaaagcgtgatgcagcgcatgtggaacagcggctatctttcaggtggtaacgct
gcctatgtggaagagctttatgagctctacctgcacgaccctaacgctgtgccagaagaa
tggcgcaccaaatttcagacgttgtcttcagacggcaacgctgccaccgatgtatcgcat
gcaacgattcgcgatcaattcgtgctgctggcaaagaaccagcgccgcgctcaaccggtt
tccgccggcagcgtgagcagtgagcacgagaagaagcaagttgaagtactgcgactgatc
caggcctatcggatgcgtggccaccaggcggcccagcttgacccgctggggctctggcag
cgtcctgcacctgctgacctgtcgatcaatcattacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
cacgaagcgttgcagcagacatattgccgcaccattggcgctgagttcacgcacatcacc
gattccgagcaacgtcactggttccagcatcgcctggaaggtgtgcgtggccgtccggtg
ttgtccgccgacgtacgcagccacctgctcgagcgcgttaccgctgccgaaggcctggaa
aaatacctgggcaccaaatacccgggcaccaagcgtttcggcctggaaggcggcgaaagc
ctgatcccgatgctcgacgagctgatccagcgttccggttcctacggtaccaaggaagtc
gtgatcggcatggctcaccgtggtcgcctgaacgtgttggtcaacaccttcggcaagaac
ccgcgtgagctgttcgacgagttcgaaggcaagaagaaggtcgagctgggttccggtgac
gttaaataccaccagggcttctcgtccaacgtgatgaccaccggcggtgaagttcacctg
gccatggcgttcaacccatcccacctggaaatcgtttctccagtggtcgagggttcggtg
cgggctcgccaggatcgtcgtaacgacaccaccggtgagaaggtcctgccgatttccatc
cacggcgacgcggcatttgccggtcaaggcgtggtcctggaaaccttccagatgtcgcag
acccgcggcttcaagaccggcggtacggttcacatcgtcatcaacaaccaggttggtttc
actatcagcaacccgctggatgcgcgctctaccgagtacgccaccgacgttgccaagatg
atccaggcgccgatcctccatgtgaatggcgatgatccggaagccgtgctgttcgtgacc
cagctcgccatcgactatcgcatgcagttcaagcgtgacgtggtgatcgatctggtttgc
taccgccgtcgcggtcacaacgaagcggacgagccaagcggcacccaaccgttgatgtac
cagcagatcagcaagcagcgcaccacccgtgagctgtacgccgaaagcctgaccaaggcc
ggtgtactggatgacgcgcgtgttcaggcgaaaatcgatgaataccgcaacgcgctggac
aatggcctgcatgttgtaaaaagcctggttaaagagccgaacaaagagttgttcgtggac
tggcgtccgtacctgggccacgcctggactgcgcgtcacgatacgtcgttcgatctgaag
accttgcaggaattgtccgccaaactgctggaaattccggacggtttcgtggtgcagcgt
caggtctcgaagatctacgaagaccgtcagaagatgcaagccggcggcctgccgatcaac
tggggttacgccgaaaccatggcgtacgcgaccctggcgttcgaaggtcacccgatccgc
atgaccggccaggacatcggccgtggtacgttctcgcaccgtcatgcggtgttgcacaac
cagaaagacgcgggcacctacatcccgttgcagaacctgtacgaaggccagccacgtttc
gacctgtacgattcgttcctgtccgaagaagccgttctggcgttcgaatacggttactcg
accaccacgcctcaggcgctggtgatttgggaagcccagttcggcgactttgccaacggt
gcacaggtggttatcgaccagttcatcaccagcggcgagcacaagtggggtcgcctgtgc
ggtctgaccatgctgctgccacacggttatgaaggtcagggtcctgagcactcctcggcc
cgtctggagcgttacctgcagctgtgcgccgagcacaacatccaggtgtgcgtgccgact
accccggcccagatctaccacttgctgcgtcgccaggtgatccgcccgctgcgcaagccg
ctggttgtgctgacaccgaagtcgctgctgcgtcataaattggccatctcgaccctggaa
gatctggctgatggttcgttccagaccgttattccagaaatcgacacgctggacgcggct
aaggtgactcgcctggtcctgtgcagcggcaaggtctactacgacttgctggaaaaacgc
cgtgccgaaggccgcgaagacatcgctatcgtgcgtatcgagcagctttacccgttcccg
gaagacgacctgatggaggccatcgcgccttacaccaacctcactcacgtggtgtggtgc
caggaagagccgatgaaccagggcgcgtggtacagcagccagcatcacctgcgtcgcagc
atcggcaaccataacaaggccctgggcctggaatatgccggccgtgatgcttccgctgca
cctgcgtgtggttatgcgtcgatgcacgccgagcagcaggaaaaactgctgcaagatgct
ttcactgtttaa

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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