KEGG T00899: PFLU5212

Pseudomonas fluorescens SBW25: PFLU5212

Entry

PFLU5212 CDS T00899

Definition

exonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

pfs Pseudomonas fluorescens SBW25

Pathway

pfs03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:pfs03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Helicase_RecD AAA_11 Viral_helicase1 AAA_22 DUF2075 AAA_25 UvrD-helicase AAA_28 AAA_17 NTPase_1 AAA_5 PhoH NACHT AAA_18 AAA_16 T2SE

Other DBs

NCBI-GI:

229592596

NCBI-GeneID:

7818644

UniProt:

C3K219

Position

complement(5707678..5709783)

AA seq 701 aa
MSLSPLPLEALMPLSRAADLVQLLERWVDRGWLRALDKAFVGFLHELDPHADPLVLLAAA
LTSHQLGHGHVCLDLFETLKAPDFALSLPPEGDLQTGAMLLPSQLLEGLDGAHWCHALAA
SHLVALAVDGSESAQSRPLVLSGKRLYLRRYWTYERRIDTALRLRLATQERVAADLPQRL
DSLFDQPPPDGVIDWQKLACALATRGAFSIVTGGPGTGKTTTVVRLLALLQAPSVESGSP
LRIRLAAPTGKAAARLTESISQQVLSLKVPDNVKEKIPTQVTTVHRLLGSRPGTRHFRHH
IGNPLPLDVLVVDEASMIDLEMMANLLDALPPHARLVLLGDKDQLASVEAGAVLGDLCRD
AEAGFYSAETRRWLQAVSGEDLSASGLQEDLDGTHPLAQQVVMLRYSRRFGEGSGIGQLA
RWVNQQNAEEARKLLAARSHDDLFCVSLKGEHDYALERLVLDGQGDGAEGYRYYLNLLQS
ARPSADTPREDTAWTHWAQQLLQAFDAFQLLCAVRKGPWGVEGLNLRITAALRKVRLIEG
DEQWYEGRPVLMTRNDYGLGLMNGDIGIALKLPESDGGPPVLRVAFPRNDGQGGVRFVLP
SRLNDVETVYAMTVHKSQGSEFTHTALILPDALNPVLTKELIYTGITRAKRWFSLIEPRG
GVFEEAVRRKVKRLSGLMLELGQESEISDAVLSLRHHPENT

NT seq 2106 nt +upstreamnt +downstreamnt
atgagcctgtcgccgttaccgctggaggcgttgatgccgctcagtcgcgccgccgacctg
gtgcaactgctggagcgttgggtcgatcgcggttggttgcgcgccctggacaaagccttc
gtcggcttccttcacgagcttgacccgcacgctgacccgctggtactgctggccgccgcg
ctgaccagccatcaattgggccatggccacgtctgcctcgacctcttcgaaaccctcaag
gcaccggactttgccctgtcgttgccgcctgaaggcgacctgcaaaccggcgccatgctg
ctgccgtcgcagttgctggaaggcctggacggcgcccactggtgccatgcgctggctgcc
agccacttggtcgcgttggcagtcgatggcagcgaatccgcccaaagtcgccccttggtg
ctgtccggcaaacgcctgtacctgcgccgttactggacctacgagaggcgcatcgacacc
gccttgcgcctgcggctcgccacccaggaacgtgtcgccgccgatttgccgcagcgcctg
gacagcctgttcgaccaaccgccgcccgacggcgtgatcgactggcaaaagctcgcctgc
gccctggccactcgcggtgcattcagcatcgtcaccggtgggcccggcaccggcaagacc
accaccgtggtgcgcctgctcgcgctgttacaggcgccgtctgtcgaaagcggcagcccg
ttgcgcattcgcctggccgcgcccaccggcaaggctgccgcacgcctcaccgagtccatc
agccagcaagtgctgtcgctgaaagtgccggacaacgtgaaggaaaaaatcccgacccag
gtcaccaccgtccaccggctactgggcagtcgcccaggcacgcggcatttccgtcaccac
atcggtaacccgttgcccctggatgtgttggtcgtggatgaagcctcgatgatcgacctg
gaaatgatggccaacctgctcgacgccttgccaccccatgctcgcctggtattactgggc
gacaaggatcaactcgcgtcggtagaagcgggcgccgtactcggtgatttgtgccgtgat
gccgaagccggcttctacagcgccgagacccgccggtggctgcaagccgtcagtggcgaa
gacctcagtgccagtggcttgcaggaagacctcgacggtacccatcccctggcccagcaa
gtggtgatgctgcgttactcacgccgtttcggcgaaggcagtggcatcggccaactggcg
cgctgggtcaaccagcaaaacgctgaagaagcccgcaagctgctggcggcgcgtagtcac
gatgatctgttttgcgtcagcctcaaaggcgaacacgattacgccctggagcgtctggta
ctggacggacagggtgatggtgccgagggctatcgctattacctcaatctgttgcaaagc
gcccggccatccgccgacaccccgcgcgaagacaccgcctggacccactgggcgcaacaa
ctgctgcaagccttcgatgctttccaactgctctgcgcggtacgcaagggcccttggggc
gttgaaggcctcaacctgcgcatcaccgccgccctgcgcaaggtgcgcctgatcgaaggc
gacgagcaatggtacgaagggcgcccggtgctgatgacccgcaacgattacggcctgggc
ttgatgaacggtgacatcggcatcgcgctgaaactgcccgaaagcgacggcggcccccca
gtgctgcgcgtagcgttcccacgtaacgatggccagggcggcgtgcgttttgtgctgccc
agccgtctgaatgatgtggaaaccgtgtacgccatgaccgtgcacaaatcccagggctcg
gagttcacccacacggcgctgatcctgccggatgcgctgaacccggtgctcaccaaagag
ttgatctacaccggcatcacccgtgccaaacgctggttcagcttgatcgaaccccggggc
ggcgtgtttgaagaggccgtgcggcgcaaggtcaagcgcttgagtgggttgatgctggag
ttgggtcaggagtcagaaatatccgacgctgtgctatcgttgcggcatcaccccgaaaac
acctga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (19)   
   Pfam (19)   
All databases (28)   

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