KEGG   Pseudomonas fluorescens SBW25: PFLU_4940
Entry
PFLU_4940         CDS       T00899                                 
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I (EC
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
pfs  Pseudomonas fluorescens SBW25
Pathway
pfs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pfs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    PFLU_4940 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfs03400]
    PFLU_4940 (sbcB)
Enzymes [BR:pfs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     PFLU_4940 (sbcB)
DNA repair and recombination proteins [BR:pfs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     PFLU_4940 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PFLU_4940 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PFLU_4940 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: CAI2799090
UniProt: C3K153
Position
1:complement(5419844..5421271)
AA seq 475 aa
MTSIFWYDYETTGINPRSDRPLQVAGIRTDLELNEIGAPVNLYCQPSDDILPHPVACAIT
GITPAILAEKGLAEADFMTRVHAELAAPGTCGAGYNTLRFDDEMTRYSLYRNFFDPYARE
WQGGNSRWDLIDVVRTAYALRPEGIEWPQQDGRVTLKLERLTEANGIDHGQAHDALSDVR
ATIALARRIREKQPKLYEWLFQLRSKQRVMDQVRLLQPMVHISGRFSAERHYLGVVLPLA
WHPRNRNALIVCDLGLDPQGLLDLDADTLRQRLYTRREALAEGELPVPLKLVHINRCPVV
APLNVLRAEDRERLHLDMNIYQERALRLTDAQEVWRDKLAAIYAEEDFAASADPEQQLYD
GFIGDRDRRLCEQVRTAEPAQLARQQWPFDDHRLPELLFRYRARNFPDTLNSEEQQRWKL
FCQQRLSSPEWGAPNTLDAFNQARQEFAVSATSFQHGVLEQWQEYADTLAARMNL
NT seq 1428 nt   +upstreamnt  +downstreamnt
gtgacctccattttctggtacgactatgaaaccaccggtatcaacccgcgcagcgaccgc
ccacttcaggtagccggcattcgtacggacctcgaactcaacgagatcggcgcgccggtc
aatctttattgccagcccagcgacgatatcctgccccatcctgtcgcctgtgcgattacc
ggtatcacccccgcgatactcgcggaaaaaggcctggccgaggccgacttcatgacgcgg
gtgcacgctgaactggccgccccggggacctgcggcgcgggttacaacaccttgcggttt
gacgatgaaatgacgcgctacagcctgtatcgcaatttctttgatccttacgcacgggaa
tggcagggcggtaacagtcgctgggatttgatcgatgtcgtccgcacggcctacgccctg
cgccccgaggggattgaatggccacagcaggatgggcgcgtcacgctcaagttggaacgc
ctgaccgaagccaacggtatcgaccatggtcaggcgcacgatgcgttgtccgacgtgcgc
gccacgattgccctggctcgacggattcgtgagaaacaacccaagctgtatgaatggtta
tttcagctgcgcagcaagcaacgggtgatggaccaggtgcgcttgctgcaaccgatggtg
cacatctccgggcgtttttccgccgagcgtcactacctgggggttgtgctgccgctggca
tggcacccgcgcaatcgcaatgccttgatcgtctgcgaccttgggctcgacccgcaaggg
ttgctggaccttgatgccgacacgctgcgccaacgtctttatacccgccgtgaagcgctg
gcggagggcgaactgccggtaccgctcaaactggtgcatatcaatcgctgcccggtggtt
gctcccttgaatgtgctacgggcagaagatcgtgaacgcctgcacttggacatgaatatt
tatcaggagcgagcgctgcggctaactgacgcacaggaagtttggcgcgataagttagcg
gccatttacgccgaagaggatttcgcagcgagtgccgacccggaacaacagctttacgac
ggttttatcggggaccgggatcggcgtttatgtgagcaagtccgcacggccgagcccgcg
caattagcacgccagcagtggccatttgatgatcaccgtttgcctgaattattatttcgc
taccgtgcacgtaacttccccgataccttgaacagcgaggagcaacaacgctggaaactt
ttttgtcagcaacgtttgtccagtccggaatggggcgcaccgaatacccttgacgcattt
aatcaggctcggcaggagtttgccgttagtgcgacgtcgtttcagcatggggtgctggag
caatggcaggaatatgcggacactctagccgcgaggatgaatctgtaa

DBGET integrated database retrieval system