KEGG   Pseudomonas fluorescens SBW25: PFLU_6086
Entry
PFLU_6086         CDS       T00899                                 
Name
(GenBank) RNA polymerase-binding transcription factor DksA
  KO
K06204  RNA polymerase-binding transcription factor
Organism
pfs  Pseudomonas fluorescens SBW25
Brite
KEGG Orthology (KO) [BR:pfs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pfs03000]
    PFLU_6086
   03021 Transcription machinery [BR:pfs03021]
    PFLU_6086
   03009 Ribosome biogenesis [BR:pfs03009]
    PFLU_6086
Transcription factors [BR:pfs03000]
 Prokaryotic type
  Other transcription factors
   Others
    PFLU_6086
Transcription machinery [BR:pfs03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     PFLU_6086
Ribosome biogenesis [BR:pfs03009]
 Prokaryotic type
  rRNA transcription factors
   PFLU_6086
SSDB
Motif
Pfam: DksA_CC zf-dskA_traR
Other DBs
NCBI-ProteinID: CAI2800211
UniProt: C3K4H2
Position
1:complement(6663508..6663912)
AA seq 134 aa
MTKQDLLAQPPADYMNEAQQGFFRELLLTQRHELQVRIDAEFLALREQETNSDPADVGSA
EEQRQWQLRLLEREKKLLDKIDDALELLARGEYGWCRDTGEPIGLQRLLLRPTATLCIEA
KEREELRERHKRTV
NT seq 405 nt   +upstreamnt  +downstreamnt
atgaccaaacaagacctgctggcccagccgcccgccgactacatgaacgaagcccaacaa
gggttcttccgtgagttgctgctgacccagcgccatgagctgcaagtgcgtatcgacgcc
gagttcctggcactgcgcgagcaggaaaccaacagcgacccggccgatgtcggcagcgcc
gaagagcagcgccagtggcagctgcgtctgctggaacgggaaaaaaagctgttggacaag
atcgacgatgccctcgaattactggctcgcggcgaatacggctggtgtcgcgatacgggt
gagcccatcggcctgcaacgcctgctgctacgtcccactgcgacactctgtatcgaagcc
aaagaacgtgaagagctgcgcgaacgccataaacggacagtttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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