KEGG   Prevotella fusca: ADJ77_00425
Entry
ADJ77_00425       CDS       T04032                                 
Name
(GenBank) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
pfus  Prevotella fusca
Pathway
pfus03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfus00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ADJ77_00425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfus03019]
    ADJ77_00425
   03400 DNA repair and recombination proteins [BR:pfus03400]
    ADJ77_00425
Enzymes [BR:pfus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ADJ77_00425
Messenger RNA biogenesis [BR:pfus03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ADJ77_00425
DNA repair and recombination proteins [BR:pfus03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ADJ77_00425
SSDB
Motif
Pfam: RecQ-1-like_HTH DEAD Helicase_C RQC HRDC RecQ_Zn_bind HTH_40 ResIII Helicase_Sgs1
Other DBs
NCBI-ProteinID: AKU69613
UniProt: A0A0K1NL65
Position
1:98258..100441
AA seq 727 aa
MTQEVNLTEKLKHYFGFDKFKGDQEAIIRNLLDGQDTFVLMPTGGGKSLCYQLPSLIMEG
TAIVVSPLIALMKNQVDVINGISEEDGVAHYLNSSLKKAEIDQVRSDIVSGRTKLLYVAP
ESLNKEENMEFLKSVKISFYAIDEAHCISEWGHDFRPEYRKIRYAIETIGTAPVIALTAT
ATDKVRTDIVRSLGIEDCAEFKSSFNRPNLYYEVRPKKNDDDTNKQIIKFIKQHAGKSGI
IYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRSKTQDDFLMEELDVIVATIAFGMGI
DKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGICVVFYSKKDLNKLEKFMEGKPVAEQ
DIGRQLLQETEAYAESSVCRRKMLLHYFGEEYPKENCCMCDNCLHPKKKIEGQKQLLIVL
QAVKTLKENFRQEYVIDFVRGRATDDQKDHKHDELDEFGEGEDEDPKIWNPVIRQALLAG
YLKKDVENYGLLKLTSAGKRFMKSPESFMIVMDAEFKEEDEDDEPMMGSAVLDPELFSML
KNLRKKIARKLEIPPYVIFQDVSLEQMAMMYPVNEQELQNIQGVGAGKAKRYGKEFCELI
KQHCEENNIERPEELRVRTVAKKSMQKVKIIQSIDRQLPLDDIASAEGLDFDDLLTKIEE
IVYSGTKLNIDYFLEDVYDEDQIDDIYDYFMDSETDSLDAAMEELDGDYSEEEIRLVRIK
FLSEMAN
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgacacaagaagtcaatcttaccgaaaaactaaaacattactttggctttgacaagttc
aaaggcgaccaagaggctattatccgcaatcttcttgacggacaagatacctttgtgctg
atgccgacaggtggtggcaagagtctttgttatcagcttccttcattgattatggaagga
acggcgatagtcgtttctccgctcattgcattgatgaagaaccaggtggacgtcatcaat
ggaatcagcgaggaagatggtgtggcgcattatctcaactcttccttgaagaaagccgaa
atcgatcaggtgcgttcggacattgtttctggtcgcacaaaactgctttatgtggctccg
gagtccttgaacaaagaggagaatatggagttccttaagtcggtgaagattagcttctac
gctatagatgaggcacattgtatctctgagtggggacatgacttccgccctgagtaccgt
aagattcgttatgccatcgaaacgattggcactgcgcctgtcattgcacttaccgcaacg
gctactgacaaggtacgtactgacattgtgcgcagtctgggcattgaggattgtgcggag
ttcaagagttctttcaaccgtcctaacctttattatgaggtgcgtccgaagaagaatgat
gacgatacgaataagcagattatcaagtttatcaagcagcatgcgggcaagagcggcatc
atctattgtctttcacgcaagaaggtggaagagctggcagccattctgcaagccaacgac
atcaaggctgctccctatcatgccggacttgactcggagacacgctccaagacacaggac
gacttccttatggaagaactggatgtgattgtggcaacgatagctttcggtatgggtatc
gacaagcctgatgtgcgtttcgtcatacattatgacattccgaagagtcttgagggttat
taccaggaaactggacgtgccggacgtgatggagaggaagggatatgtgtcgtgttctat
tccaagaaagacctcaataaactggagaagttcatggagggaaagcctgttgctgaacag
gatatcgggcgtcagctgttacaggaaacggaagcctatgcggaatcatctgtctgtcgt
aggaagatgctgttgcattactttggtgaggagtatccgaaggagaactgctgtatgtgc
gacaactgtctgcatcccaagaaaaagattgaaggtcagaagcaacttctcattgtcctt
caggctgtcaagacgctgaaagagaacttccggcaggagtatgtcatcgactttgtgcgg
ggtagggctactgacgaccagaaagaccacaagcacgacgagttagatgaattcggtgag
ggtgaggacgaagatccgaagatatggaatcctgtgatacgtcaggcgttactggctggc
tatctgaagaaggatgtagagaactatggactgttgaagctgacttctgccggtaagcgg
ttcatgaagtcgcccgagtcgtttatgatagttatggatgccgaattcaaggaggaggat
gaggacgatgagccaatgatgggttcggcggtgcttgatccggaactcttctccatgctg
aagaaccttcgcaagaagattgcgcgtaagttggaaatccccccttatgttatcttccag
gatgtttccttggagcagatggcaatgatgtatcctgtcaacgaacaggaactgcagaat
atccagggcgtcggtgccggtaaggcgaaacgttatggaaaggagttctgtgaactgata
aagcagcattgtgaggagaataacatcgaacgtccggaggaactgcgtgtcaggacagta
gcaaagaagtcgatgcagaaggtcaagattatacagagtatcgaccgtcagttgccgctt
gatgacatcgcatcagctgaaggacttgatttcgatgacctgctgacaaagatagaggag
attgtctatagtggaacgaaactcaacatcgactacttccttgaggatgtgtatgatgaa
gaccagatagacgatatctacgattatttcatggatagcgaaactgacagtcttgatgct
gcgatggaagaacttgatggcgattacagcgaagaagaaatccgccttgtccgcatcaag
ttcctgtcagagatggccaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system