KEGG   Pseudomonas fulva: Psefu_0166Help
Entry
Psefu_0166        CDS       T01501                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pfv  Pseudomonas fulva
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pfv00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Psefu_0166
Enzymes [BR:pfv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Psefu_0166
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Psefu_0166
DNA repair and recombination proteins [BR:pfv03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Psefu_0166
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
188095..188907
Genome map
AA seq 270 aa AA seqDB search
MPELPEVETTRRGIAPHLIGQRVSRVIVRERRLRWPIPEDLDVRLSGQRIEAVERRAKYL
LIKAEVGTLISHLGMSGNLRLVEAGLPAAKHEHVDIELESGLALRYTDPRRFGALLWSEL
PLEHELLVRLGPEPLTELFDGERLFQLSRGKAVAVKPFIMDNAVVVGVGNIYATEALFAA
GIDPRRAAGTVSRARYVRLAQEIKRVLAHAIERGGTTLRDFIGGDGQPGYFQQELFAYGR
GGEFCKVCGSTLREVKLGQRASVYCPKCQR
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattgccagaagtcgaaaccacgcgccgtggtatcgccccccacctcattggt
cagcgcgtcagtcgggtcatcgtgcgtgaacggcgcctgcgctggccgatccccgaagac
ctcgatgtgcgcctgtccggccagcgtatcgaagccgtggagcggcgcgccaagtacctg
ctgatcaaggccgaagtcggcacgctgatcagccacctgggcatgtccggcaacctgcgt
ctggtcgaggcggggctgccggcagccaagcacgagcatgtggatatcgagctggagtcc
ggcctggcgctacgttacaccgacccgcggcgcttcggcgcgctgttgtggagcgaactg
ccgctggagcatgagctgctggtgcgcctcggcccggagccgctgaccgagctgttcgat
ggcgagcgcctgtttcagctgtcgcgcggcaaggcggtggcggtcaaaccgttcatcatg
gacaacgcggtggtggtgggcgtcggcaacatctacgccaccgaggcgctgttcgccgcc
ggcatcgatccgcgccgcgccgccggcacggtgtcgcgggcgcgctacgtgcgcctggct
caggagatcaagcgggtgctggcccacgccatcgagcgcggtggcactaccctgcgcgac
ttcatcggcggcgacggccagcccggttacttccagcaggagttgttcgcctatggccgc
ggcggcgagttctgcaaggtgtgcggcagtaccctgcgcgaggtgaagctgggccagcgg
gccagcgtttattgcccgaaatgccagcgctga

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