KEGG   Pseudomonas fragi: AV641_07030
Entry
AV641_07030       CDS       T04285                                 
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
  KO
K01825  3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
pfz  Pseudomonas fragi
Pathway
pfz00071  Fatty acid degradation
pfz00280  Valine, leucine and isoleucine degradation
pfz00310  Lysine degradation
pfz00362  Benzoate degradation
pfz00380  Tryptophan metabolism
pfz00410  beta-Alanine metabolism
pfz00640  Propanoate metabolism
pfz00650  Butanoate metabolism
pfz00907  Pinene, camphor and geraniol degradation
pfz00930  Caprolactam degradation
pfz01100  Metabolic pathways
pfz01110  Biosynthesis of secondary metabolites
pfz01120  Microbial metabolism in diverse environments
pfz01200  Carbon metabolism
pfz01212  Fatty acid metabolism
Module
pfz_M00087  beta-Oxidation
pfz_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00640 Propanoate metabolism
    AV641_07030 (fadB)
   00650 Butanoate metabolism
    AV641_07030 (fadB)
  09103 Lipid metabolism
   00071 Fatty acid degradation
    AV641_07030 (fadB)
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    AV641_07030 (fadB)
   00310 Lysine degradation
    AV641_07030 (fadB)
   00380 Tryptophan metabolism
    AV641_07030 (fadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    AV641_07030 (fadB)
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    AV641_07030 (fadB)
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    AV641_07030 (fadB)
   00930 Caprolactam degradation
    AV641_07030 (fadB)
Enzymes [BR:pfz01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     AV641_07030 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     AV641_07030 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     AV641_07030 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  Delta3-Delta2-enoyl-CoA isomerase
     AV641_07030 (fadB)
SSDB
Motif
Pfam: 3HCDH_N ECH_1 3HCDH ECH_2 NAD_binding_2
Other DBs
NCBI-ProteinID: AMB78836
Position
1487546..1489693
AA seq 715 aa
MIYEGKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSAFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMADSARIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDAL
KVGAVDAVVTLDKLGAAALDVIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASQCLIGLFLNDQEL
KKKAKAYDKIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVR
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEEDKRGKQ
KKVVDSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPLFRGGALRYIDSIGVAQFVALADQYAELGALYHPTAKLREMAKNGQSFFG
NT seq 2148 nt   +upstreamnt  +downstreamnt
atgatttacgaaggtaaagccatcacggttacggctcttgaaagtggcatcgtcgaactc
aagttcgatctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaattg
cgtcaggcagtggatgcgatcaaggcagatgcttcggtcaagggtgttatcgtttccagc
ggcaaagacgtgtttatcgtcggcgcagacatcaccgaattcgtcgaaaatttcaagttg
ccggatgctgagctgatcgcgggtaacctcgaagccaacaaaatcttcagtgctttcgaa
gacctcaatgtacctaccgttgcggccatcaatggcatcgcgttgggtggcggtctggaa
atgtgcctggcagcggacttccgcgtcatggccgacagcgccaggattggcctgcctgaa
gtaaaactgggcatctacccgggcttcggcggcaccgtacgtttgccgcgtctgatcggc
gttgataacgctgttgaatggattgcttcgggtaaagaaaaccgcgctgaagacgccctg
aaagtcggcgccgttgatgctgttgtcaccctggacaaactgggtgcagctgcgctggac
gtgatcaagcgcgccatcagtggcgagctggactacaaggccaagcgccagccaaagctt
gaaaaactcaagctgaacgcaattgaacaaatgatggctttcgaaaccgccaaaggtttc
gtcgccggccaggccggaccaaactacccggccccggttgaagcgatcaagactatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagttgaagccgcaggtttcgccaaa
cttgcaaaaacatcggcttcgcaatgcctgatcgggttgttcctcaacgaccaggaattg
aagaaaaaggccaaggcctacgacaagatcgccaaagacgtgaagcaggcagccgtactc
ggcgctggcatcatgggcggcggtattgcctatcagtcggcttccaaaggcacgccgatc
ctgatgaaagacatcaacgaacacggcatcgagcaaggtctggcagaagccgccaagctg
ctggtaggtcgcgttgataaaggtcgcatgaccccggcgaaaatggccgaagtgctcaac
ggtattcgtccgaccctgtcttacggtgatttcggcaacgtcgacctggtggtcgaagct
gtagtcgagaacccgaaggtcaagcaggccgtactggctgaagtggaaaaccacgtccgc
gaagacgcgattctggcgtccaacacttcgactatctccatcagtttgctggccaaggcc
ctcaagcgtccggagaactttgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtcattcgtggcgagaaatccagcgacctggctgtagcaaccaccgttgcc
tacgccaagaaaatgggtaaaaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggtttcgccaggctggtcagcgccggtgtcgac
tttgtgcgcatcgacaaagtgatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgtgacgtgatggctgaaggcttc
cctgatcgcatgaaagacgatcgccgctcggcgattgacgctctgtacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaagaagacaagcgcggcaagcag
aagaaagtcgttgattccagcgtacttgaagtgctcaagccgattgtctacgagcagcgc
gacgtgactgacgaagacatcatcaactggatgatgatcccgctgtgtctggaaaccgta
cgctgcctggaagacggcatcgttgaaactgcggccgaggccgatatgggtctggtttac
ggcattggcttcccgctgttccgtggcggcgcattgcgctacatcgactcgatcggtgtt
gcacagttcgtggccctggctgatcagtacgctgaactgggcgcgctgtaccacccgact
gcgaagctgcgcgagatggccaagaacggtcagagcttcttcggttaa

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