KEGG T04285: AV641

Pseudomonas fragi: AV641_16400

Entry

AV641_16400       CDS       T04285

Name

(GenBank) glutamine--tRNA ligase

K01886

glutaminyl-tRNA synthetase [EC:6.1.1.18]

Organism

pfz Pseudomonas fragi

Pathway

pfz00970

Aminoacyl-tRNA biosynthesis

pfz01100

Metabolic pathways

Brite

KEGG Orthology (KO) [BR:pfz00001]
09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AV641_16400
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pfz01007]
    AV641_16400
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pfz03016]
    AV641_16400
Enzymes [BR:pfz01000]
6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.18  glutamine---tRNA ligase
     AV641_16400
Amino acid related enzymes [BR:pfz01007]
Aminoacyl-tRNA synthetase
  Class I (A)
   AV641_16400
Transfer RNA biogenesis [BR:pfz03016]
Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    AV641_16400
Prokaryotic type
   Other AARSs
    AV641_16400

SSDB

Motif

Pfam:

tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 DUF4965

Other DBs

NCBI-ProteinID:

AMB80535

Position

complement(3662344..3664041)

AA seq 565 aa
MSKPTVDPTLNPKAGPAVPANFLRPIVQADLDSGKCKQIVTRFPPEPNGYLHIGHAKSIC
VNFGLAQEFGGVTHLRFDDTNPAKEDQEYIDAIESDVKWLGFEWSGEVRFASQYFDQLHE
WAVYLIKEGKAYVCDLTPEQAKEYRGSLTEPGKNSPFRERSVEENIDLFARMKAGEFEDG
KRVLRAKIDMASPNMNLRDPILYRIRHAHHHQTGDKWCIYPNYDFTHGQSDAIEGITHSI
CTLEFEGHRPLYEWFLDNLPVPSKPRQYEFSRLNLNYTITSKRKLKQLVDEKHVHGWDDP
RMSTLSGFRRRGYTPKSIRNFCDMVGTNRSDGVVDFGMLEFSIRDDLDHSAPRAMCVLRP
LKVIITNYPQGQVENLELPRHPKEDMGVRVLPFAREIYIDRDDFMEEPPKGYKRLEPAGE
VRLRGSYVIRADEAIKDADGNIVELHCSYDPETLGKNPEGRKVKGVVHWVPAAASVECEV
RLYDRLFRSPNPEKAEDGAGFLENINPDSLQVLTGCRAEPSLGNAQPEDRFQFEREGYFC
ADIKDSKPGQPVFNRTVTLRDSWGQ

NT seq 1698 nt +upstreamnt +downstreamnt
atgagcaagcccactgtcgaccctactttgaatcctaaggctggccctgctgtaccggct
aatttcctgcgtcccatcgtgcaggcggaccttgactcgggtaaatgcaaacagatcgtg
acccgcttcccgcctgagcccaacggctacctgcacatcggtcacgccaagtccatttgc
gtgaactttgggctggctcaggaatttggcggcgtcacccatttgcgttttgacgacacc
aacccggccaaagaagaccaggaatacattgatgcgatcgaaagtgacgtcaagtggctg
ggctttgagtggtcgggtgaagtgcgctttgcctcgcaatatttcgatcagttgcatgag
tgggcggtttacctgatcaaggaaggtaaggcctatgtctgcgacctgacacctgaacag
gccaaggaataccgtggcagcttgaccgagcctggcaaaaacagcccgtttcgtgagcgt
agcgtcgaagaaaacatcgacctgttcgcccgcatgaaggctggcgagttcgaagacggc
aagcgtgtgttacgggccaagatcgacatggcttcaccgaacatgaacctgcgcgatccg
atcctgtatcgcattcgtcatgcccatcaccatcagaccggtgacaagtggtgcatttat
ccgaactatgacttcacccatggtcagtcggatgcgatcgaaggcattacccattcgatc
tgcaccctggagttcgaaggtcatcgccctctgtacgaatggttcctcgacaacctgccg
gtgccgagcaagccgcgtcagtacgagttctcgcgcctgaacctgaactacaccatcacc
agcaagcgcaagctcaagcaactggttgatgaaaagcacgttcatggctgggatgacccg
cgcatgtcgaccctctcgggtttccgtcgtcgtggttacacgcccaaatcaatccgcaac
ttctgcgacatggttggcaccaaccgctccgatggcgtggttgacttcggcatgctggag
ttcagcattcgtgacgatctggaccacagcgctccgcgcgcgatgtgtgtgctgcgtcca
ttgaaagtcatcatcaccaactacccgcaaggccaggtcgaaaacctggagctgcctcgc
caccctaaagaagacatgggtgtacgagtgctgccattcgcccgtgagatttacatcgat
cgtgacgactttatggaagagccgccaaaaggttacaagcgccttgagcctgccggtgaa
gtgcgcctgcgcggcagctatgtgattcgtgctgacgaagcgattaaagacgccgatggc
aacatcgttgaactgcattgctcgtacgatcccgaaacgctgggcaagaaccctgaaggc
cgcaaggtcaagggtgttgtgcattgggtgccggctgctgccagcgtcgaatgcgaagtg
cgtctgtacgatcgtctgttccgctcgccgaaccctgaaaaggctgaggatggtgcgggc
ttcctggaaaacatcaacccggattcgctgcaggttcttacgggttgtcgtgctgagccg
tcgctgggcaacgcacagccggaagaccgtttccagttcgagcgcgaaggttacttctgc
gcagatatcaaggactcgaaacctggccagccggtattcaaccgtactgtgaccttgcgt
gattcctggggtcagtga

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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