KEGG   Phaeobacter inhibens DSM 17395: PGA1_c23190
Entry
PGA1_c23190       CDS       T02192                                 
Symbol
lpdA3
Name
(GenBank) dihydrolipoyl dehydrogenase LpdA
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pga  Phaeobacter inhibens DSM 17395
Pathway
pga00010  Glycolysis / Gluconeogenesis
pga00020  Citrate cycle (TCA cycle)
pga00260  Glycine, serine and threonine metabolism
pga00280  Valine, leucine and isoleucine degradation
pga00310  Lysine degradation
pga00380  Tryptophan metabolism
pga00620  Pyruvate metabolism
pga00630  Glyoxylate and dicarboxylate metabolism
pga00640  Propanoate metabolism
pga00785  Lipoic acid metabolism
pga01100  Metabolic pathways
pga01110  Biosynthesis of secondary metabolites
pga01120  Microbial metabolism in diverse environments
pga01200  Carbon metabolism
pga01210  2-Oxocarboxylic acid metabolism
pga01240  Biosynthesis of cofactors
Module
pga_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pga_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pga_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pga_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pga00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PGA1_c23190 (lpdA3)
   00020 Citrate cycle (TCA cycle)
    PGA1_c23190 (lpdA3)
   00620 Pyruvate metabolism
    PGA1_c23190 (lpdA3)
   00630 Glyoxylate and dicarboxylate metabolism
    PGA1_c23190 (lpdA3)
   00640 Propanoate metabolism
    PGA1_c23190 (lpdA3)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PGA1_c23190 (lpdA3)
   00280 Valine, leucine and isoleucine degradation
    PGA1_c23190 (lpdA3)
   00310 Lysine degradation
    PGA1_c23190 (lpdA3)
   00380 Tryptophan metabolism
    PGA1_c23190 (lpdA3)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PGA1_c23190 (lpdA3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pga04147]
    PGA1_c23190 (lpdA3)
Enzymes [BR:pga01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PGA1_c23190 (lpdA3)
Exosome [BR:pga04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PGA1_c23190 (lpdA3)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored NAD_binding_8 GIDA HI0933_like Pyr_redox_3 XdhC_C AlaDh_PNT_C DAO FAD_binding_2 2-Hacid_dh_C UDPG_MGDP_dh_N Thi4 3HCDH_N Amino_oxidase
Other DBs
NCBI-ProteinID: AFO92003
Position
2404809..2406188
AA seq 459 aa
MSDNHADLIVLGAGPGGYACAFRAADLGRSVIIVDPRATLGGVCLNVGCIPSKALLHAAE
MIRETRHGGGWGILTGNVSVDLNKLRAKKDSIVEQLTTGLVGLAKRRKVQTIRGSAQFTS
DKSLEIDGESWTFDQAVIAVGSAPVRLPGWPEDDRIWDSTDALELREIPKRLSIVGGGII
GLEMATVYAALGSKVTVIEFMDQIAPGADADAVTILRAALETEDVTIHTGTKVTEVKASK
TALTLTCEGGFEGTIKADAAIQAVGRRSNGSLVDPAAAGVEADDRGIIPVDASCRTNVAT
VFAIGDVTGNPMLAHRATHQGHVAAEVASGHATALDTDLIPSVAYTAPELAWAGLTQAKA
TERGIPHRVANFPWAASGRNLSSGGGEGLTKLVYCPDSHRLLGATIVGRNAGELLAECVL
AMEMGATLEDMSLAVHAHPTLSETVGFAAERALGTLTDL
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtctgacaaccacgccgatctcatcgttctgggcgcaggcccgggtggctatgcctgt
gcctttcgcgccgccgatctggggcgcagtgtaatcatcgtcgacccacgcgcgacactt
ggtggcgtctgcctgaatgttggctgcatcccttccaaagccctcttgcatgccgccgag
atgatccgcgagacccgacacggcggaggctggggcatcttgaccggcaacgtctctgtc
gatctgaacaagttgcgcgcgaagaaggacagcatcgttgaacaattgaccactggcctc
gtcggccttgcgaagcgacgcaaagtccagaccattcgaggctcggcgcagttcacaagc
gacaagagccttgagattgatggcgagtcatggaccttcgatcaagccgtgattgctgtg
ggctcagcgcctgtgcgcctgcccggctggcccgaggatgatcgtatctgggactccacc
gatgcacttgaactgcgtgagattcccaaacggctttcgatcgtgggcggcggcatcatc
gggttggaaatggcgacggtctatgcggcgcttggcagcaaggtgactgtcatcgagttc
atggatcagatcgcccccggcgcggatgccgacgcagtcacgatcctgcgtgccgcgctc
gaaacggaagatgtcacgattcacacaggcaccaaagtgaccgaggtgaaggcctcaaaa
accgccctgacgctcacctgtgaaggcgggtttgagggcaccatcaaggcggatgcggca
attcaggcggtgggccgtcgctcaaacgggagcctcgttgatccggccgctgcgggagtc
gaggctgacgaccgaggcatcatcccagtggatgcgtcctgccgcaccaacgttgcgacc
gttttcgccattggcgacgtcaccggcaacccgatgctggcacaccgcgcgacccaccaa
ggccatgtggcggccgaagtcgcctcgggccatgccaccgctctggataccgatctcata
ccgtcggtcgcctacacggcacctgaattggcctgggccggccttacacaggccaaagcc
acggaacgcggtatcccgcacagagttgccaattttccctgggccgcgagcgggcgcaac
ctttcatcgggcggtggggaagggttgaccaaactggtctattgccccgactcccatcgc
ctgctgggcgcgaccattgtgggacgaaatgccggagagcttttggcagaatgtgtgctg
gcaatggaaatgggtgcaacactcgaagatatgtcactcgcggtccatgcacacccgaca
ctttccgaaaccgttggctttgccgcagaacgcgccctgggcacgctaaccgatttgtaa

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