KEGG   Pseudomyrmex gracilis (graceful twig ant): 109851772
Entry
109851772         CDS       T05003                                 
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
  KO
K15544  RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109851772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgc03021]
    109851772
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109851772
Enzymes [BR:pgc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     109851772
Transcription machinery [BR:pgc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     109851772
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     109851772
SSDB
Motif
Pfam: Ssu72
Other DBs
NCBI-GeneID: 109851772
NCBI-ProteinID: XP_020277768
Position
Unknown
AA seq 196 aa
MPAPKNSLSVAVICSSNMNRSMEAHAFLSKKGFNVKSFGTGDKVKLPGTAPDRPNIYDFG
TSYEEIYNDLLMKDKQYYTQNGLLHMLDRNRRIKPRPERFQLSRDKFDILISCEERVYDQ
VIECMDSRTKEDNQPVHLINIDIQDNHEEATVGSFLICELVTVLANSEDLDNDIDELLHE
FESKFARTLLHTVLFY
NT seq 591 nt   +upstreamnt  +downstreamnt
atgccagctccgaagaattctctcagcgtcgccgtaatatgctccagtaatatgaacagg
agcatggaggcgcacgctttcttgagcaaaaagggatttaacgtgaagtcatttggaact
ggagataaagtcaaactgcctggaaccgcaccagatcgtcctaatatctatgactttggg
acttcttacgaggaaatctacaatgatctattaatgaaagacaaacaatattatacacag
aatggtttattacacatgttagaccggaatcgtcggataaaacccagaccggaacggttt
caattgtccagggacaagttcgacattttaatttcttgcgaggagcgagtgtacgatcaa
gtgatcgaatgtatggattccagaacaaaggaggataatcaaccagtccacttgatcaat
attgacattcaggacaatcacgaagaggccacagtaggatcgtttcttatatgcgaatta
gtgacagtgttggcgaatagcgaagacttagacaatgacatagatgaattactccacgaa
ttcgagtcgaagttcgcgagaacgttattgcacaccgtgctgttttactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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