KEGG   Pseudomyrmex gracilis (graceful twig ant): 109858250
Entry
109858250         CDS       T05003                                 
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
  KO
K13174  THO complex subunit 5
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109858250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgc03019]
    109858250
   03041 Spliceosome [BR:pgc03041]
    109858250
Messenger RNA biogenesis [BR:pgc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     109858250
Spliceosome [BR:pgc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    109858250
SSDB
Motif
Pfam: FmiP_Thoc5 ATAD4 DUF6621
Other DBs
NCBI-GeneID: 109858250
NCBI-ProteinID: XP_020290913
Position
Unknown
AA seq 667 aa
MGKENESDGTKKRRKSVSANSGTSVKDGDMYKTIICFEEKEAIERQPEDDSENFLRTCND
IRAAMAKIAKLKASGDPSVKDEISELQVQTSLAFIELKKLNRMEKFRTKFARDSLVAAKS
SVDSRHLHLQNLLYEVMHLKKEVIKCLQFKSKDEMIELVSEAEFYKEAPETISRPEITRN
NPHQLRLARLEWELMQRKQLAALCDELTENKKVVASNIEMKQTRLDNLAPQLRSILEASK
PLQESLGLPLDKIRQEHQKASLLPSPLYVLYAKASAYRDAYDSTLLVKVEGDEDEAKRTN
NQDGLQESDSDPETQPESIAEETLVHKKRHHRLSREARQEEKRSKLLQIHPLHVKIVITL
KNETRLTLQFYYMIHLKVVTVESKLETEDLGGVSAGDMLVSESILRELYPGDLGLESPNP
ANQYQLSRHSLGSFSSLGLGIPYRWAQRMAGLHFVSPDVNEQKLVSRELAQDCVESVLKE
IKRRVKARIDLRAEIRQLESGNLPILISTTDPIPQKISTSLHRFTTLTWRNYSNYVITPA
FFEQKLVSSLDIFYEAVLRRGSSELVAKIAIKPDYPKIAPVFSVSISPMVPASADIIRDI
EREVNVMWTKSPTLTAQIQRLRACFDIYLETESMAPKEKIFFHPVRGRTRARPYKYLPLG
GGIFTHR
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgggcaaagagaacgaatcggatggtacgaagaaaaggagaaaatccgtgagtgcgaat
agcggaacatcagtgaaagacggagatatgtacaagacaataatttgtttcgaagagaag
gaagctatcgagagacaacccgaggatgattctgaaaactttttgagaacttgcaacgat
attcgagcagcaatggcaaagatagctaaattgaaagccagtggagatccgagtgtaaaa
gatgaaatcagtgaattgcaagttcagacatcccttgcttttatagaactgaagaaactg
aatcgcatggagaagtttcgtacaaagtttgcaagagattccttggtggctgcaaaaagc
agcgtagacagcagacatctgcatctgcagaatctgctatatgaagtgatgcatttgaag
aaagaagttatcaagtgtcttcaattcaaatcaaaggatgaaatgatagagcttgtttcg
gaagctgaattttataaagaagctccagaaaccatttcaagacctgaaataacaaggaat
aatcctcaccaactgagactagctcgtttggagtgggaattgatgcaaaggaagcaattg
gctgcactgtgcgacgaattaacagagaacaaaaaggtagtggcgtccaacatcgaaatg
aaacagactcgcttggacaatcttgcgcctcaactgcgttctatattagaggcgagcaaa
ccgctgcaagaaagtctcggattgccgttagacaaaattcgccaagagcatcaaaaagca
tcattgttaccatctcctctctatgtgttgtacgcaaaagcatctgcttatagagacgcg
tacgacagtacacttctagttaaagtggaaggtgacgaggacgaggcgaaacgaacaaac
aatcaggacggtctacaagaatccgattccgaccccgagactcaaccggagagtatcgcg
gaagaaacactcgtgcacaagaagagacatcacagattatctcgagaagccaggcaggag
gagaagcgatctaaattgcttcagatacatccgttacacgtcaaaattgttatcacgtta
aaaaatgagacaaggttgactcttcaattctattacatgattcacttaaaagtcgtcacg
gttgagtcaaaactcgaaaccgaagacttgggaggtgttagcgccggagatatgcttgtg
tccgagtcgattctccgtgaactgtatccgggtgatttaggactggagagtccgaatcca
gccaatcagtatcaactgtcgcgacacagtctgggctcgttttcatccctgggattggga
attccgtacagatgggcgcagagaatggctggtttgcatttcgtttcacctgacgtaaac
gaacaaaagcttgtgagtcgagaattggcgcaggactgtgttgagagtgtgttgaaggaa
atcaaacggcgcgtgaaggcgcggatagacctgcgcgccgagatacgacagctggaatcc
ggcaatttgccgatcctgatcagcacgacggatccgataccgcagaaaatctccacgtcg
ctgcaccgattcacaactctgacctggagaaactactcgaattacgtcattacgccggcg
ttcttcgagcagaaattggtgtcgtcactggacatcttctacgaagctgtacttcgtcgt
ggcagtagcgaactcgtggcgaagatcgccatcaagccggactatccgaagatagcgccg
gtgttcagcgtgagcattagtccgatggtgccggcgtcggcggacatcatcagggacatc
gagagagaggtcaatgtgatgtggaccaagtcgccgacgttaacggcgcagattcaacgg
ctgagagcgtgtttcgatatttatctggaaactgagagcatggcgccgaaagagaagata
ttctttcatcccgtaagagggcgaactcgcgcccgaccgtataaatatttgccactcgga
ggaggtattttcactcaccgttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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