KEGG   Pseudomyrmex gracilis (graceful twig ant): 109859412
Entry
109859412         CDS       T05003                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pgc03009]
    109859412
Enzymes [BR:pgc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     109859412
Ribosome biogenesis [BR:pgc03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    109859412
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII SNF2-rel_dom Transformer Helicase_C_2
Other DBs
NCBI-GeneID: 109859412
NCBI-ProteinID: XP_020293253
Position
Unknown
AA seq 591 aa
MKTRKWEELKELNIWLSNPVLKTLKQLEFFEMTPVQEACIPLLLSGKDVAVEAVTGSGKT
LAFLIPLLEMLQKRPEKWKPMEVGAIIISPTRELATQISEVLGQFLKLIPSLKEVLLVGG
TTPEEDVKKLTKGMNIIVATPGRLEDILSNCKTINLSLCVKSLEFLVLDEADRLLDLGFS
VTLNSILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPAIIVIKEKSNVSTPVNLKNSYT
IVQAQHKLSIMIDFIRSIGLQQTKYMIFLPTCACVDYFSKVIQALLPSIDVFCLHGKMKS
QRFKVFDQFRQAKNGVLICTDVMARGIDISEIQWVLQYDPPSIASNFVHRCGRTARIGNE
GNSLLFLLETEDAYVDFIKRNQKVELQQIETKPDDNTVEECLRCMRKLQQQDRLMFDKAN
RAFVSYIQAYNKHECNLILRLKDMDLGKVAMGFGLLKMPKMPELKGKDVSFFVGPEIDVN
EIPYANKQRELHRIKKLIKYQNTGVWPGKCKRKQKQTESWSESKKKHHERQEKRNKRKQQ
KKLEQHSASAKKKRKLIDEESLAELAKDIALIKKFKKKKISEEEFDMAFGV
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgaaaacacgaaaatgggaagagttgaaagagttaaatatatggttaagcaatcctgta
ttaaaaacattaaaacaattggagttctttgagatgacaccagttcaggaagcttgcata
ccattattattgagtggtaaagatgttgcggtagaagcagttacaggcagtggaaagacg
cttgcttttcttattccattattggagatgttacaaaaacgaccagaaaagtggaagcct
atggaagtaggagctataataatcagtccaacaagagaactagctacacaaattagtgaa
gttttaggacaatttttaaagttgatcccatcattgaaggaagtattacttgttggaggt
acaacaccagaagaagatgtaaagaaattgacaaagggaatgaacattattgttgctact
cctgggagattggaagacattttatctaattgtaaaactataaatttgagtttatgtgta
aaatctctggaatttcttgtactggatgaagcagatagattattagacttgggtttttca
gttacattaaatagtattttaagctatttaccacgtcttagaagaacaggattgttctct
gcaacacaaacaaaagaattgcagcaattaattagggcaggactgagaaatcctgcaata
attgttataaaggaaaaatcaaatgtttcaacaccagtaaatttgaagaacagttacaca
attgttcaggctcagcacaagctgtcaatcatgatagatttcatacgttcaattggactt
caacaaacaaagtatatgatatttttacctacttgtgcatgtgtggactactttagtaaa
gtaatacaagcattgttgccatcaattgatgtattttgtctacatggcaaaatgaaaagt
cagagattcaaagtatttgatcaatttcgacaggccaaaaatggcgttttaatatgtacc
gatgtaatggcacgtggaattgacatatctgagatacaatgggttttgcagtatgatcct
ccttccatcgcaagtaattttgtacacagatgtggtagaactgctagaatcggcaatgaa
ggaaattcattgctatttcttctggagacggaggatgcgtatgttgattttattaaaaga
aatcagaaagtcgaattgcaacaaatagaaacaaaaccagatgataatactgtggaagaa
tgcttgcggtgtatgagaaagttgcaacaacaagatcgacttatgtttgataaggcaaat
cgcgcgtttgtttcgtacatacaggcgtataataaacacgaatgtaatttgattcttcga
ttgaaggatatggatttaggaaaggtggccatgggtttcggattgttaaaaatgccaaaa
atgcccgaacttaagggaaaggatgtctcattttttgttggtcctgagatcgacgttaat
gaaataccttacgcaaacaaacaacgtgaattacacagaataaagaaattaattaagtat
cagaacactggtgtctggccgggtaaatgcaagcgtaaacagaaacaaaccgaatcctgg
tcagaatccaaaaaaaaacatcacgaaaggcaagagaaacgaaacaaacgaaaacaacag
aagaaattggaacaacattcagcttcggctaaaaagaaaagaaaactaattgatgaggaa
tccctcgcggaattagcaaaagatatagcgttgatcaagaaattcaaaaagaaaaagatc
tcagaagaagagtttgatatggcttttggagtctaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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