KEGG   Pseudomyrmex gracilis (graceful twig ant): 109860730
Entry
109860730         CDS       T05003                                 
Name
(RefSeq) DNA topoisomerase 3-beta-1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
pgc  Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03440  Homologous recombination
pgc03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pgc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    109860730
   03460 Fanconi anemia pathway
    109860730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pgc03032]
    109860730
   03400 DNA repair and recombination proteins [BR:pgc03400]
    109860730
Enzymes [BR:pgc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     109860730
DNA replication proteins [BR:pgc03032]
 Eukaryotic type
  DNA Topoisomerases
   109860730
DNA repair and recombination proteins [BR:pgc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     109860730
   FA (Fanconi anemia) pathway
     109860730
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-GeneID: 109860730
NCBI-ProteinID: XP_020295600
Position
Unknown
AA seq 851 aa
MKTALMVAEKPSLAASLANILSNGRCSTRKGLNGSCSVHEWVGQFRSETVNFKMTSVCGH
VMTLDFIGKYNNWDKVDPAELFSCPTEKKEAVPKLRIPYFLGKEGSHCDYLILWLDCDKE
GENICFEVVNAVQQGMHRKLHINDIWRARFSAITEKDIKAAMANLIKPNENEAKSVDARQ
ELDLRIGCAFTRYQTKFFQGKYGDLDVSLISYGPCQTPTLGFCVQRHDEIQTFKPDPYWV
LQVTIKSSDGQDIILSWSRVRSFDKEVATMFLSHVKEHDQATVVSIQSTEKSKSRPIALN
TVELMRVASSGLGMGPQHAMQVAERLYTQGYISYPRTETTSYPDNFDLLSTLKQQQNSPD
WGEEVRKILASGINRPKKGHDAGDHPPITPMKHATRGELDGDAWRLYDYITRHFIATLAR
DCKYLSTTVKFEIGIEIFTTTGHSLLDPGYTNILTWQALGNSDTLPKFTTDEKVNIQEAK
LVECYTQPPDYLTEAELISLMEKHGIGTDASIPVHINNICVRNYVTVAAGRKLVPTSLGI
VLVHGYQKIDPELVLPTMRSAVEEQLNLIALGRADFHAVLQHTVEIFKQKFHYFVQSIEA
MDQLFEVSFSPLSASGKAHSRCGKCRRYMKYIQTKPSRMHCAHCNETYNLPQNGNIRIYK
ELKCPLDDFELLSWSTGTRGKSYTFCPYCYNNPPFRDMKKGMSGCNSCTHPTCPHGMNSN
GLSSCLECDLGILVLDPSAAPKWKLGCNRCDVIIHLFENAHKVTVDTDTCDCGAQLVSVE
YKQDKSKLPNEATEMSGCVFCTPAFVPLVEKHRAVASKPVVTRSRGHTKSRNRGKPKPPK
DKMAQLAAYFV
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgaagaccgcgttaatggtagctgagaagccttctctggcagcatctcttgctaatata
ctgagcaatggacggtgcagtaccagaaaaggtttgaacggatcttgttccgttcacgaa
tgggtgggccagttcagatcagaaactgtcaattttaaaatgacatccgtatgcgggcac
gtcatgacgttggatttcattggaaagtacaacaattgggacaaagtagatccggcagag
ttgttctcatgtccaaccgagaagaaggaagctgtgccaaaactcagaataccatatttt
ctgggcaaagaaggctctcattgtgattacttaatattgtggctggattgtgacaaagag
ggcgagaatatttgctttgaagttgtcaatgctgtacagcaaggaatgcacagaaagttg
catataaatgatatatggcgagcacgattctcagctatcacggagaaggatataaaagct
gctatggcaaatttaataaaacccaatgaaaatgaagctaaaagtgtagacgcacgtcaa
gaattagatctgcgaataggttgtgcattcactcgctatcaaaccaaattcttccaaggc
aaatacggagatttagatgtatcgcttatttcttacggtccctgccaaacgccgacatta
ggattctgtgttcagaggcacgatgaaattcaaaccttcaaaccggatccgtactgggtg
ttacaggtaaccattaagtctagcgatggtcaagacattatactgagctggagccgtgtg
cgttccttcgacaaagaagtcgcaaccatgttcttgagtcatgtaaaagagcacgatcaa
gcaacggtagtgagtatacagagtacagagaaatcaaaatcgcgacctatagctttgaac
acagtggaactgatgcgagtcgcgagttctggattgggaatgggtccgcagcacgcgatg
caggtcgcggaaagactttacactcaaggatacataagttatcctcgaacggaaactaca
tcgtatcccgacaacttcgacctgttatcaacgctgaaacagcaacaaaacagtccggat
tggggcgaggaggttcgcaagatattagcgtccggtatcaacaggccgaagaaaggtcat
gacgcaggcgaccatcctcctataacacccatgaaacacgcgacaagaggcgaactggac
ggcgacgcgtggcgattgtacgattacataacgcgacattttatcgccacgttggcgcga
gattgtaaatatctgagcaccacggtgaaattcgagataggcatagagatattcacaacc
accggtcacagcctgctcgatcccggatacacgaatattctcacttggcaagcgctcggc
aacagcgacacgctgcccaagttcacgaccgacgagaaagtgaacatacaagaggcgaag
ctggtcgaatgttacacgcaaccgccggattatctgactgaagcggaattgatctcgctc
atggagaaacacggcatcggaacggacgcttcgattcccgtgcacataaacaacatctgc
gtgagaaattacgtcaccgttgcggcaggcagaaagttggtgcccacgtctctcggcatc
gttttggtccatggatatcaaaagatagatcctgaattagttttgccaacaatgagatcc
gcggtggaggagcaattgaatctgatagcgttaggtcgcgccgactttcacgctgtattg
caacacaccgtggagatcttcaagcagaagtttcattatttcgtgcagagcatagaagcc
atggatcagttgttcgaagtctcgttctcgccgttgtcggcatccggtaaagcgcattcc
agatgtggcaagtgccgtcgatacatgaaatacatacagacgaaaccgtctagaatgcat
tgcgcgcactgcaacgagacttacaacttgccacaaaatggaaacatacgaatatacaag
gaattgaagtgtccgctggacgacttcgaattgctctcgtggtcgaccgggacacgggga
aagagctacacattttgtccgtactgttacaacaatccgccgttcagagacatgaagaaa
ggaatgagcggttgtaattcgtgcacgcatccgacgtgtccgcacggcatgaactcgaac
ggtttgtccagttgtttggaatgcgacctcggcattctcgtgcttgacccttcggccgct
cctaaatggaaactgggatgcaatcgttgcgacgttatcatccatctctttgagaacgcg
cacaaagtaacagtcgacacggacacttgcgactgcggggcgcaattagtgagcgtcgaa
tacaaacaggacaaaagtaaactcccgaacgaggcgacggaaatgtccggttgcgtgttc
tgcactccagccttcgtcccgctggtggaaaagcatcgtgcggtggcttcgaaaccggtc
gtcacgcgtagtcgcggtcacacaaagagtcgcaatcggggcaaacccaaaccgccgaaa
gacaaaatggctcaactggcggcgtatttcgtataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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