KEGG   Phaeobacter gallaeciensis DSM 26640: Gal_02512
Entry
Gal_02512         CDS       T02968                                 
Name
(GenBank) Superfamily II DNA and RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
pgd  Phaeobacter gallaeciensis DSM 26640
Pathway
pgd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pgd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Gal_02512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgd03019]
    Gal_02512
   03009 Ribosome biogenesis [BR:pgd03009]
    Gal_02512
Enzymes [BR:pgd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Gal_02512
Messenger RNA biogenesis [BR:pgd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Gal_02512
Ribosome biogenesis [BR:pgd03009]
 Prokaryotic type
  rRNA helicases
   Gal_02512
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII IKI3
Other DBs
NCBI-ProteinID: AHD10257
UniProt: V9WME1
Position
complement(2524450..2526729)
AA seq 759 aa
MNPVQKGPKPISARTWMRTSAFLRSRGHSRYRRGQGGAPRSKRNEILKTALEQALQARGY
EHLTPVQEAVTAAELDQSDLLVSAQTGSGKTVGFGLAMAPTLLGDAEKLDRADLPLALVI
APTRELALQVKRELGWLYAEAGAHVVSTVGGMDMRDERRALERGAHIVVATPGRLRDHIM
RGSLNLSQVRAVVLDEADEMLDLGFREDLEFILGESPEERRTLMFSATVPAGIARLAETY
LKDHQRIKTVAEASQHADIEYQMLAVAQRDVENAVINVLRFHESPNAIVFCNTRAVVNRM
TTRLSNRGFSVVALSGELSQAERSNALQSLRDGRARVCVATDVAARGIDLPKLDLVIHAD
LPSSHETLLHRSGRTGRAGRQGVSALIVPPKAKGKALRLLRSAKITAETSPAPSADDVRS
RDFERLLGDKAWSEPVSENETAPVAELVERFSPEQLAAAYLRLFHDRHSAPEELSDPQHD
KRERQERAPFGPSVWFAVSGGRKAGAEPRRLLPALCNAGGLTKDDIGAIRVQFDQSYVEV
REGSAESFWGAVKHDGLEEGANVTRLDKAPDLPKSPRPQGREGGGFRDDKRGHRGQDRGD
RGDRGDRGDRGGERGERKPYGDKPRFDKPRGDKPAYGDKPRGEKPYGDKPRASKPYGDKP
RSDKPAYGDKPRFDKPKRTGEGGKATVTARGSSDRGAAPSAPAKPAVPGKPKGDWSNPGK
SGRKGPPPPKGKPNSKKNKARAAVAGKAGGNARPQRKGS
NT seq 2280 nt   +upstreamnt  +downstreamnt
atgaaccctgtacaaaaggggccaaagccgatatcagcgcgcacttggatgaggacatcc
gcgttcctgcgcagtcggggacattcccgatatcggcgtggccaaggtggcgcgccccgc
agcaagcgaaatgaaatcttgaaaacagcactcgaacaagcgcttcaggcgcgcggctac
gagcatttgacacccgtgcaagaggccgtcactgcagccgagctggaccagtccgacctt
ctggtgtcggcccagaccggttccggcaaaaccgtaggctttggcctggcgatggccccc
acattgttgggcgacgccgagaaactggaccgtgccgatctgccgctggcactggtcatt
gcgccgacccgtgaactggcgttgcaggtcaaacgcgaacttggctggctttatgccgaa
gccggggcacatgtggtctctaccgttggtggtatggacatgcgcgatgagcggcgtgca
ctggaacgtggcgcccatatcgttgtggcgacaccgggccggctgcgcgaccacatcatg
cgcggctccctcaacctgtcgcaggtccgcgccgtggtgttggacgaagccgatgagatg
ctcgatctgggcttccgcgaagatcttgaattcattctgggcgagtccccggaagagcgc
cgcacattgatgttctcggccaccgtgcctgcgggcattgcgcggctggcggagacctat
ttgaaggatcaccagcggatcaaaaccgtggcagaagcctcgcagcatgcggatattgaa
tatcagatgctggccgtggcgcagcgggatgtcgagaacgcggtcattaacgttcttcgc
ttccacgagtcgcccaatgcgattgtgttctgcaacacccgtgcggtggtgaaccggatg
accacgcggctgagcaatcgcgggttttccgtggttgccctgtccggtgagctgtcccag
gcggagcggtccaacgcgctgcagtccctgcgggacgggcgggcccgtgtctgcgtggca
acggatgtggcggcgcgcgggatcgacctgccgaagctggatctggtcattcacgcggat
ctgccatccagccatgagacgctgttgcaccggtcgggccgtactggccgtgccgggcgt
cagggcgtgtccgcgctgatcgtgccgccaaaggcaaagggcaaggccctgcgcctgctg
cgctcggccaagatcacggcagagaccagcccggcccccagtgccgatgatgtccgcagc
cgcgactttgagcgcctactaggcgacaaggcctggagcgaaccggtcagcgaaaacgag
accgcccctgtggcagagctggttgagcggttctcgcccgagcagctggccgccgcctat
ctgcgtctgttccacgatcgccacagcgcgcctgaggagctgagcgatccgcagcacgac
aaacgtgagcgccaagaacgcgcgccctttggtccgtccgtgtggttcgccgtcagcggt
ggccgcaaggccggtgccgagccgcgccgactgctgcctgcactgtgcaatgccggaggg
ctaaccaaggatgatatcggcgcgatccgggttcagtttgaccaaagctacgtggaagtg
cgcgagggcagcgccgaaagcttctggggcgcggtgaaacatgacggtctggaagagggg
gcaaatgtcacccgtctggataaagcgccggatctgcccaaatccccacgcccgcagggc
cgtgaaggcggtggtttccgcgatgacaaacgcggccatcgtggacaggatcgcggagat
cgcggagatcgcggagatcgtggagatcgcggtggcgaacggggggagcgtaagccctat
ggcgacaagccccgctttgacaaaccgcgcggcgacaagcctgcttacggtgacaagcca
cgtggtgaaaaaccatatggcgacaagccgcgggccagcaaaccctatggcgataaaccg
cgcagtgacaaaccggcctatggcgacaagccccgtttcgataagcccaagcgcacaggt
gagggcgggaaagccacggtgaccgcacgcggatcgtcggaccggggggcagcgccgtcg
gcgcctgccaaacctgcggttccgggtaagcccaagggcgattggtccaatccgggaaaa
tcgggtcgtaaaggaccgcctccgccgaaggggaagcccaacagcaagaaaaacaaggca
cgtgcagccgttgccgggaaagccggtggcaacgcgcggcctcagcgcaagggcagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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