KEGG   Puccinia graminis: PGTG_01084
Entry
PGTG_01084        CDS       T02226                                 
Name
(RefSeq) DNA-directed RNA polymerase III subunit C1
  KO
K03018  DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
Organism
pgr  Puccinia graminis
Pathway
pgr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PGTG_01084
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgr03021]
    PGTG_01084
Enzymes [BR:pgr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PGTG_01084
Transcription machinery [BR:pgr03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     PGTG_01084
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 10543745
NCBI-ProteinID: XP_003320172
UniProt: E3JUM8
AA seq 1419 aa
MKQIVLQEAPQKIKHIQFSVLSSQEIVALSEYESTQRDLYSMVGSENNGISIPGAIEPLV
KKPAKGGVLDSRLGTSDKSGICGTCNAKMADCVGHYSYIKLILPVFHIGYFRAVIQMLQD
ICKTCARVLLSEEDRRLYLIKFRRPNLENLQRQHLAKQVNTACRKIITCPYCGATNGTVK
KVGALRIIHEKFRAKKKADELAAFRDTFITAVKETKELGPHLHKAQEDMNPLRVLNLFRR
ITPSDCELLGLDPEVGRPEEYIWQYIHVPPVCIRPSVAQEAATNEDDLTVKLTEIIFTNT
LIKTGLVKGVPTQNIMEQWEFMQLSVAMYINAELPGVPSQMGVKPIKGFCQRLKGKTGRF
RGNLSGKRVDFSGRTVISPDPNLSITEVAVPDRVAKILTYPERVTAHNIDRLRQCIRNGP
DIHPGANYLVAGSTTNASGSALPFKRSLKFGNRNHVANTLRLGDTVERHLHDGDVVLFNR
QPSLHKLSIMSHRAKIRPWRTFRFNECVCTPYNADFDGDEMNLHVPQTEEARTEATELMN
IKYNLVTPRNGEPIIAATQDFITASFLLSRKDNFYDRQQFSQILQYLSDATLHIDLPPPV
IWKPVRLWTGKQVFNVLMRPNKDSPVKVNVEAKCATHQKAAPEYLPDMSPNDGWLVIQNS
EIMCGVVDKAIVGGGKKDSIFAVINCDFGPDEAVKAMNRLAKVSARWLANMGFSIGVGDV
TPGERLSTQKNALVAKAYKETDELIQQSKAGKLETLPGRDLDQTLEAMISGVLSKVRDSL
GEICMAELTRHNAPLIMATCGSKGSKINVAQMVACVGQQIISGNRIPDGFQDRSLPHFHK
KAKEPPAKGFVRNSFHSGLRATEFLFHAISGREGLVDTAVKTAETGYMQRRLMKALEDLA
TRYDDSVRNSVGGVVQFTYGDDGLDPTYLEGDGEPVEFARTWRHTKATVSHLDGRGLHPY
EITQLVTDGLAQPRFTTACTQRFRDSVLDFMVERVVKPAANFRQSYGMYPALELEGDWDE
YTDLSAGVSEASKKIVINKTQVTLKQIETFLDHCWKKYVKAKVEPGTAVGAVGAQSIGEP
GTQMTLKTFHFAGVASMNITLGVPRIKEIINASKLINGPIINAPLVANHNERSARIVKAR
LEKTYLGDVTSVIEEMYSNDSMYLGIHIDMETVQRLQLEVTLDSIKWSIINAPKLKITAD
QIQIIPRKNRIRVYVDTNLADGEKVLPFYQKLMFLRRVLPGVVIKGLPKAGRTVINKNSK
NEYELLVEGYGLLDVMTTDGVVGTHTMPNHIMEAQSVLGIEAARNCIIKEISYTMDSHGL
KVDPRHMMLLGDIMCYKGEVLGITRFGIAKMKDSVLMLASFEKTTDHLFDAALYSKRDAI
EGVSECIIMGNPANDIGTSAACLVSEVPKLPPRRKVLFY
NT seq 4260 nt   +upstreamnt  +downstreamnt
atgaagcaaatcgtattgcaggaagcgccccagaagataaaacatatccaattctccgtt
ttatcttctcaagagatcgtggcattatccgaatatgaatccactcaacgtgatctctat
agcatggttggatcggagaacaatggaatcagtattccaggtgcaatcgaacccctcgtc
aagaaacccgccaaaggtggcgtcttggatagcagattgggaacgtccgacaaatccgga
atatgcggaacttgtaacgcgaaaatggcagactgcgtcggccactactcctacatcaaa
ctcatcctcccggtattccatatcggttactttcgggcggtgatccagatgctccaagat
atttgcaagacgtgtgctagggtgctcttatcagaagaagatcggcggctgtatctcatc
aagtttcgacgtcccaatcttgagaacctacagcgacagcacctagccaagcaagtcaac
actgcctgccgcaagattatcacttgtccttattgcggtgctaccaacggtaccgtcaag
aaagtcggtgctttacgaatcattcatgagaaattcagagcaaagaagaaagcagatgaa
ctagcggcgttcagagatacctttatcaccgccgtcaaagaaactaaagaattaggacca
caccttcacaaggctcaggaagatatgaacccactccgagtactgaatctctttcgaagg
ataaccccttcagattgtgaattgcttggtttggaccctgaagttggacggcctgaagaa
tacatttggcagtacattcatgtcccaccggtctgtatcaggcccagtgttgcacaagag
gccgccacaaacgaagatgatctgacagtcaaactaacagaaattatctttaccaatacc
ctgatcaaaaccggactagtcaagggggttccaacacaaaacattatggagcaatgggaa
ttcatgcagctctcggttgccatgtacatcaatgctgaacttcctggagtcccttcccaa
atgggggtcaaaccaatcaaaggcttctgccaaagactgaaaggaaaaactggtcgattt
cgtggcaatctatccggtaaacgtgtcgacttttctggtcgaacggtcatcagtcccgat
ccgaatcttagcatcacagaggtggcggttccggatcgggtggcaaaaatcctgacgtat
cctgaacgggttactgctcataacattgatcggctacggcaatgtatccgaaatggacct
gatatccatccgggtgccaactatcttgtggcaggcagcacaacaaacgcaagcggaagc
gcgctccccttcaaaagatctttaaaattcgggaatcggaatcatgtcgcgaacaccctt
cgattaggggacacagtggagaggcatttacatgatggagatgttgtactcttcaatcgg
cagccgagtctgcacaaactgtcaatcatgtctcatcgagccaagatacgaccttggcga
acttttcgattcaacgagtgtgtttgcacaccctacaatgctgatttcgacggagatgaa
atgaatttgcatgtaccgcagactgaagaagcccggactgaagccacggagctgatgaat
atcaaatataaccttgttacccctcgaaatggcgaaccgatcattgctgccactcaagat
ttcattaccgcctcgtttctattatctagaaaagataacttttatgaccgacagcaattc
agccaaatcctccaatacttgtctgatgctaccttacacatagatctcccacctccggta
atttggaaacccgttcgactatggactggcaagcaagtctttaacgtcctcatgaggccg
aacaaagattctcctgtgaaagtcaatgttgaagccaaatgtgctacacatcaaaaagct
gcacccgaatatttgcccgacatgtcgcctaatgatggctggctcgtcattcaaaattca
gaaatcatgtgtggggtagtcgataaagctattgtgggtggaggaaaaaaggattcgatc
ttcgcagtcatcaattgtgactttggtcctgatgaagctgttaaggccatgaatagactt
gccaaagttagtgctcggtggctagcgaatatgggattttccatcggtgtcggcgatgtt
acgccgggtgaaagactatctacccagaaaaacgcactggttgccaaagcctataaagag
acggacgaacttattcagcaatcgaaagctggcaaactagaaaccctgccagggcgcgac
ttggatcaaacacttgaggctatgatttccggagttctctcaaaggtcagagacagtttg
ggtgagatttgtatggcggaactcacaaggcacaatgcacctttgatcatggcgacctgt
ggatccaaaggttccaagattaacgtggcccagatggtagcttgcgttgggcaacagatt
atcagcggtaatcgtatcccggatggttttcaagaccggtctcttccccacttccacaag
aaagccaaagagccaccagccaaaggtttcgtcagaaacagtttccattctggccttcgt
gcaaccgagtttctcttccatgcaatctctggtcgagaaggtctcgttgataccgcggtc
aagaccgccgagacaggttatatgcaaaggagattgatgaaagccttagaagatctggcc
actcgttacgatgactccgttagaaactctgtgggcggagtcgtccagtttacctatgga
gatgatggcttggatcctacttacttagagggagacggcgagcctgtggaatttgcccgt
acttggaggcacaccaaagccacagtttcgcaccttgatggacgagggcttcatccatac
gaaatcacccaattagtgaccgatggtctagctcagcctcgttttaccaccgcttgcacc
caacgtttcagagactcggtcttggatttcatggttgagcgggtcgtcaagcctgctgcg
aatttcagacagagctatggcatgtatcccgctctagaattagaaggagattgggacgaa
tacacagacctgtctgccggagtgagcgaggccagtaagaaaattgttatcaataagacg
caagtcaccctcaaacaaatagagacattcttggaccattgctggaaaaaatatgtcaaa
gctaaagtcgagccaggtactgccgtcggtgctgtcggtgctcaatcgattggtgaacct
ggaacccaaatgacgttgaagactttccattttgctggtgtagcctccatgaacattacg
cttggtgtacctcgaatcaaagagattataaatgcttccaaactgattaacggaccgatc
atcaacgcacctctagtggctaatcacaatgaaaggtccgccagaatcgtcaaggcccgg
ctggagaaaacctacttgggtgatgtcacatctgttatcgaagaaatgtattccaacgat
tcaatgtaccttggtattcacatcgacatggaaaccgttcaacgcttgcagctggaagtc
accttagattcaatcaaatggtcaatcatcaacgcgcctaaattgaaaattactgctgac
caaatacaaatcattcctcgcaagaatcgtatccgggtttatgtagataccaacttagca
gacggtgagaaagtactaccgttttatcaaaagttgatgttccttcgccgagtccttcca
ggcgtggtgatcaaaggccttcccaaagctggccggacagtcatcaacaaaaacagcaag
aatgaatatgaacttctcgtcgaagggtatggtctgcttgatgtaatgaccacagatggt
gttgttggcacacatactatgcccaatcatatcatggaagcacaaagtgtgctagggatc
gaagcggctcgaaactgtattattaaagaaatctcgtacacgatggactcgcacggattg
aaagtcgacccgcgacacatgatgttattaggagacatcatgtgctacaagggagaagtg
cttggaatcacccgatttgggattgccaaaatgaaagattcagtccttatgttggcttcg
ttcgagaaaacaaccgaccatcttttcgatgctgccttgtatagcaaaagagacgctatc
gaaggcgtgtcggaatgtatcatcatgggcaaccccgcaaatgatatcggcacatcagcg
gcttgtttggtctccgaagtacccaaacttccacccagacgaaaagtcctgttttattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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