KEGG   Puccinia graminis: PGTG_07648
Entry
PGTG_07648        CDS       T02226                                 
Name
(RefSeq) hypothetical protein
  KO
K12878  THO complex subunit 1
Organism
pgr  Puccinia graminis
Pathway
pgr03013  Nucleocytoplasmic transport
pgr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PGTG_07648
  09122 Translation
   03013 Nucleocytoplasmic transport
    PGTG_07648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgr03019]
    PGTG_07648
   03041 Spliceosome [BR:pgr03041]
    PGTG_07648
Messenger RNA biogenesis [BR:pgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     PGTG_07648
Spliceosome [BR:pgr03041]
 Complex C
  Other components
   EJC/TREX
    PGTG_07648
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PGTG_07648
SSDB
Motif
Pfam: efThoc1 Erf4 INTS5_N
Other DBs
NCBI-GeneID: 10529624
NCBI-ProteinID: XP_003326670
UniProt: E3KCW5
AA seq 962 aa
MTNQPTTKMVKNIYSDYQTQLTNQLTNYIDRLDKQQRTTTTPTTRQNIIQEITEQLPALP
EQATELRRLIISSVFSSLISHLNQNRKEGEQDYTLYHLLDLVLAFIDHGLAAPELALGCI
EEILEASTVQQAQFIFGYLESRVQRLTVDMLPDRGKGLIFLRMQNNLLRRLSKSLHTVFC
GRILCFLSSVFPIAEKSGVNLRGAFNHGNITKFDQFDSPPSTMLISNNNSTTDEIEAGSK
EIEKITPQDSTPRPNEEIKPDDSARVKASKSATDKREFYTRFWSLQALLSNPPELFKSWT
PDPTVPPALPSSSTTTTTTATTSATSATSATLDPNSSQPSTPNLKKLKDGISKTLEVFGR
MTKKELELGTSHLHKSEDMDGLEQFFFPKFLTKSNLLDLEIADPYFRRQVLTQFLIILQY
IRGFSPEERAKRASLPKSNRISEIPYVYQAKDEAWVLKLSGEVWKTLYATPPHGEIFAMT
IQQILIRESSWIMWKAGSCASFEKASLDDLDPAPGYKRITSNPVKFPHPVGTPALSKLWE
NKVTLDSIENIDPTAGVPDLKTLHLKIQHLDLQLKQLQENLPPDTDPKAETIKSQVQQLQ
ERKTGLSWRALRIAQSSHLQFFGKIGMPADINKLMMVIEESKNRGSVPLSRPVSGMNASP
LTTPNLQSMSGSATTGVEEESMGKACTGETTQELQRVPSNEASQPDVVMLDGESIMESVG
GPGGLASELDGELISESLPSVAPPVPSGSTDEVRSATSPVSRPASPQPIPSAVAPTVSTI
IPPTLSRHHSHPQQQPVSSSSSSQIRTSPTQTLHHEPHRMSDVEQVIRRMEAQANRSAVG
TPTPPPPQSSSGTSGGRHGPGSGGSGGGGGSGDYSRPHHPHTGLLYYHPSLPSHPHHNNH
GPRLGPPPGRPNSNNNSNNNSNLNNLNTLREHPGILKRPVAEVIDLEAPDLAIGNDPKKH
KN
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgaccaaccaaccaacaacgaagatggtcaagaacatctactcagactaccaaacccag
ctcacaaaccaactaaccaactacatcgaccgactagacaaacaacaacgaacaaccacc
acaccaaccacaagacaaaacatcatacaagaaataacagagcagctgccagcactgcca
gaacaagcaaccgaactcagacgattgatcatctcatcagtcttctcatcactcatcagt
catctcaatcagaacagaaaagaaggagaacaagactacacgctctaccatctactcgat
ctcgtactagccttcatcgatcatggtctcgctgcacccgaactggcactgggctgtatt
gaagagatactcgaggcttcgaccgtccaacaggcccaattcatctttggatatctcgag
tcaagagtccaaagattgactgtcgatatgttgcccgacagagggaaagggctaatcttc
ctaaggatgcaaaacaacctcctcagaagactctcgaaatcattgcataccgtgttctgt
gggaggatcttatgcttcttatcctcagtcttcccgatcgccgagaagagtggtgtcaac
ctacgaggagcattcaatcatgggaacatcaccaagttcgaccaattcgactcacccccc
tcgaccatgctcatctccaataataatagtactaccgatgaaatcgaagcgggcagtaaa
gagatcgagaaaattactccccaagattcgaccccgagaccaaacgaagagatcaaacca
gatgattcggctcgagtcaaggcatccaagtcagctaccgacaagcgtgaattttatacg
cgattctggtccctacaagctctcctttcgaacccgccagagctattcaagtcctggacg
cctgacccgaccgtcccaccagcactcccctcatcatcaacaacaacgacaacaacagcg
acgacttcagcgacttcagcgacttcagcgacacttgatcccaactcatcccaaccctcg
actccgaacctcaaaaaactcaaggacgggatctcgaagacgttggaagtctttgggagg
atgaccaagaaagaactcgaactcggcaccagccatctccataaatctgaagacatggac
ggactcgaacagttcttctttcccaagttcttgaccaagagtaacttgttggacctcgag
attgcagacccttacttccgacgtcaagtcttgactcaattcttaatcatcttgcaatat
atacgtggcttctctcctgaagaacgagccaaacgcgcctccttaccgaaatcaaaccgg
atcagtgaaatcccttacgtctatcaagccaaagatgaggcttgggtactcaagttgagt
ggagaggtctggaaaacgctttatgctactccacctcatggggaaatcttcgcaatgacg
atccaacaaattctgattcgagaatctagttggatcatgtggaaagctggctcgtgtgcc
agttttgagaaagctagcttagacgacctcgatccggcgcctggatacaaacgcatcacc
agtaacccggtcaagtttcctcatccagtggggacacctgctctcagtaaactttgggaa
aacaaagtcacgttggactcgatcgaaaatatcgatcctaccgccggggtccctgatctg
aaaactctgcatctgaaaattcagcatcttgatcttcagttgaaacagcttcaggagaat
ctgcctcccgataccgatcctaaagctgaaaccataaaatcacaagttcaacagctccaa
gaacgaaaaacaggattatcatggagagcattacggatagcccagagttcccacttacaa
ttttttgggaagatagggatgccagcggatatcaacaagttaatgatggtgattgaggaa
tcgaagaaccgagggagtgtaccactgagtcggccggtgtcggggatgaacgcgtcgccg
ctgacgacgccgaacctccaatcgatgagtggctcggcgacgaccggggtggaggaggag
tcgatggggaaggcgtgtacaggggagacgacgcaggagctgcagcgggtgccgtcgaac
gaggcgagccagccggacgtggtgatgcttgatggggagagcatcatggagagcgttggt
gggccgggggggttggctagcgagcttgatggcgagctgatcagcgagagcttgccctcg
gttgcaccgcccgtcccaagcggctccaccgacgaggtccggtcggccaccagcccggtc
tcccgccccgcctcgccccagccgatcccctccgccgttgcacccaccgtctccaccatc
attcctccgaccctcagccgtcaccactcccatccgcaacaacaacccgtctcctcctcc
tcctcatcccagatccgcacctcaccaacccagaccttgcatcacgagccacacaggatg
tcggacgtagaacaagtgatccgacggatggaggcccaagcaaatcggtccgcagtcggc
acacccacccctccgcctccgcagagctcttctggtacttcaggtggtcgacatggccct
ggctctggtggtagtggtggtggtggcggctctggagattactctcgccctcatcaccca
catacaggtctactctattaccacccttcgctaccttcccatcctcaccataacaaccat
ggccctcggctaggccctcctcccggtcgtcctaactcgaataataatagcaacaataac
tcgaatcttaacaatctcaatactctgagagagcatcccgggatccttaaacgtcctgtc
gccgaggtcatcgatctcgaagcccctgatctggcgatcggtaatgatcctaaaaaacat
aaaaattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (56)   

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