KEGG   Porphyromonas gingivalis TDC60: PGTDC60_1209
Entry
PGTDC60_1209      CDS       T01516                                 
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase D
  KO
K06180  23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Organism
pgt  Porphyromonas gingivalis TDC60
Brite
KEGG Orthology (KO) [BR:pgt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pgt03009]
    PGTDC60_1209
Enzymes [BR:pgt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.23  23S rRNA pseudouridine1911/1915/1917 synthase
     PGTDC60_1209
Ribosome biogenesis [BR:pgt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    PGTDC60_1209
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: BAK25364
Position
complement(1245185..1245868)
AA seq 227 aa
MEVVYEDNHLIIVNKAVGEIVQGDKTGDSPLSETVKQWIKEKYAKPGKVFLGVAHRLDRP
VAGLVVFAKTSKALARLNNMFRDGKVQKVYRAIVKQRPPKDGDTLVHYISRNERLNKSFA
SVCKVPNSKKASLSYRLLASSDNYHLLEIELHTGRHHQIRCQLATMGCPIKGDLKYGFGH
SNPDGGISLLAHRIRFTHPVSGVLIDLTAPLPSNDKLWSLLTSKVGD
NT seq 684 nt   +upstreamnt  +downstreamnt
atggaagtcgtttacgaagacaatcatctgatcatagtcaataaggctgtcggggagatt
gttcaaggcgataagactggtgacagccctctgtccgaaacggtcaagcagtggatcaaa
gagaaatatgccaagccgggcaaagtcttcctcggtgtagctcatcgtttggatcgtcct
gtggccggactggtcgtttttgccaaaacgagtaaggctttggcgcggctcaataatatg
tttcgcgatgggaaggtgcaaaaggtgtatcgtgccatagtcaaacaaaggcctcccaag
gacggagatacgctcgtccattatatcagtcgaaacgaaagactgaacaaaagctttgct
tcggtatgcaaagtgccgaacagtaagaaggcttctctctcttatcgcttattagcttcg
tccgacaattaccatcttttggaaatagagctacatactggccggcaccatcagattcgt
tgccagctcgcaactatgggttgtcctatcaagggcgatttgaaatacggattcgggcac
agtaatccggatggaggaatcagtctgctggcccatcgaattcgtttcactcatcctgtc
agcggcgtcctcatcgatctcaccgctcctcttccctcgaatgataaactttggtctttg
cttacttccaaggtcggcgattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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