KEGG   Porphyromonas gingivalis TDC60: PGTDC60_1227
Entry
PGTDC60_1227      CDS       T01516                                 
Symbol
recR
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
pgt  Porphyromonas gingivalis TDC60
Pathway
pgt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pgt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PGTDC60_1227 (recR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgt03400]
    PGTDC60_1227 (recR)
DNA repair and recombination proteins [BR:pgt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     PGTDC60_1227 (recR)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      PGTDC60_1227 (recR)
SSDB
Motif
Pfam: Toprim_4 RecR_HhH RecR_ZnF Toprim HHH zf-P11 HHH_5
Other DBs
NCBI-ProteinID: BAK25382
Position
complement(1264501..1265124)
AA seq 207 aa
MIQKYPSHLLEKAIDQFATLPGVGRKTALRLALYLLRQPVENTRQFAAALVDLREHISYC
RRCHNISDSDVCTICADPTRDQSTLCVVENIRDVMAIENTSRYRGLYHVLGGVISPMDGI
GPGDLQIDSLVHRVASEQIREVILALSTTMEGDTTNFFLFRKLEPTGVRVSVIARGIAIG
DEIEYADEITLGRSILNRTDFSDSVKF
NT seq 624 nt   +upstreamnt  +downstreamnt
atgatacagaaatatccttcgcatctgcttgagaaggcgatagaccaatttgctacattg
ccgggtgtagggcgcaagacagccctgcgcctggctttgtacttattgcgccaacctgtg
gaaaatacccgtcaatttgcagcagcccttgtagatcttcgggaacatatttcctattgc
aggcgctgtcataatatcagtgattccgatgtttgtactatttgtgcagaccccactcgg
gatcagagtacactctgtgtagtagagaatatccgtgacgttatggctatcgagaatacc
tcacggtatcgaggcttgtatcatgtacttggtggagtcatatctcccatggatgggatc
ggcccgggcgatttgcaaatagattctctggtgcatcgagtagcttccgaacagattcgt
gaggttatattggctttgagtacgacgatggagggcgatactaccaactttttcctcttt
cgcaagttggagcctaccggcgttcgggtcagtgtaattgctcgaggcattgctataggc
gatgagatcgaatatgccgatgagattaccctcggtcgttctattctcaatcgtaccgat
ttctccgactcagtcaaattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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