KEGG   Polymorphum gilvum: SL003B_0052Help
Entry
SL003B_0052       CDS       T01458                                 

Gene name
trpB
Definition
Tryptophan synthase subunit beta
Orthology
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
pgv  Polymorphum gilvum
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:pgv00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    SL003B_0052 (trpB)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SL003B_0052 (trpB)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    SL003B_0052 (trpB)
Enzymes [BR:pgv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     SL003B_0052 (trpB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(55812..57056)
Genome map
AA seq 414 aa AA seqDB search
MTTIANTLRSGPDARGHFGIYGGRYVAETLMPLILDLEQAYADAKADPAFRAELDDLNTH
YTGRPSPLYFAERLTEHLREVSEASGLGGGAKIYFKRDELNHTGSHKINNCLGQILLAKR
MGKTRIIAETGAGQHGVATATVCARFGLPCVVYMGATDVERQKPNVFRMKLLGAEIVPVT
AGAGTLKDAMNEALRDWVTNVDSTYYLIGTAAGPHPYPELVRDFQSVIGQEVREQMLAAE
GRLPDALVAAVGGGSNAIGLFHPFLDDASVAIYGVEAGGKGLDGHEHCASLNAGRPGVLH
GNRTYLLQDGDGQILEGHSISAGLDYPGIGPEHAWLKDTGRVTYVPATDDEALAAFQMLT
RVEGIIPALEPAHALAQVIKLAPTMDRDKIIVMNLCGRGDKDVFTVGKILGFDL
NT seq 1245 nt NT seq  +upstreamnt  +downstreamnt
ttgacgaccatcgcgaacaccctgcggtcgggtcccgacgcacgcggccatttcggcatc
tatggcggccgctacgtggccgagaccctgatgccgctgatcctcgacctcgagcaggcc
tatgccgacgccaaggccgatccggcgttccgcgccgagctggacgacctcaacacccat
tacaccggccggccctcgccgctctatttcgccgagcggctgacggagcatcttcgtgag
gtttctgaggcctccggcctcgggggcggcgcgaagatctacttcaagcgcgacgaactc
aaccacaccggcagccacaagatcaacaactgcctcggccagatcctcctggccaagcgc
atgggcaagacgcgcatcatcgccgagaccggcgccggacagcacggcgtcgccaccgcc
accgtctgcgcccgcttcggcctgccctgcgtggtctacatgggcgccaccgacgtcgag
cggcaaaagcccaacgtgttccgcatgaaactgctcggcgccgagatcgtgccggtcacc
gccggcgccggcacgctcaaggatgccatgaacgaggccctgcgcgactgggtcaccaac
gtcgacagcacctattatctcatcggcaccgccgccggcccgcacccctatccggaactg
gtgcgcgacttccagtcggtcatcggccaggaggtgcgcgagcagatgctggcggccgag
ggccgcctgccggatgcgctggtcgccgccgtcggcggcggctccaacgccatcggcctg
ttccatcccttcctcgacgacgcctcggtggcgatctacggcgtcgaggccggcggcaag
ggtctcgacggccacgagcactgcgcctcgctcaacgccggccggcccggcgtgctgcac
ggcaaccgcacctacctgctgcaggacggcgacggccagatcctcgagggccactcgatc
tcagccggcctcgactatcccggcatcggcccggagcatgcctggctgaaggacaccggc
cgcgtcacctacgtgccggcgaccgacgacgaggcgctcgccgccttccagatgctgacc
cgcgtcgagggcatcatcccggcgctggagccggcccatgcgctcgcccaggtcatcaag
ctggcgccgaccatggacagggacaagatcatcgtcatgaacctgtgcggtcgcggcgac
aaggacgtcttcaccgtcggcaagatcctcggcttcgatctctga

DBGET integrated database retrieval system