KEGG T01458: SL003B

Polymorphum gilvum: SL003B_0052

Entry

SL003B_0052 CDS T01458

Gene name

trpB

Definition

Tryptophan synthase subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

pgv Polymorphum gilvum

Pathway

pgv00260	Glycine, serine and threonine metabolism
pgv00400	Phenylalanine, tyrosine and tryptophan biosynthesis
pgv01100	Metabolic pathways
pgv01110	Biosynthesis of secondary metabolites
pgv01230	Biosynthesis of amino acids

Module

pgv_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:pgv00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:pgv00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

328541676

NCBI-GeneID:

10417399

UniProt:

F2IYH8

Position

complement(55812..57056)

AA seq 414 aa
MTTIANTLRSGPDARGHFGIYGGRYVAETLMPLILDLEQAYADAKADPAFRAELDDLNTH
YTGRPSPLYFAERLTEHLREVSEASGLGGGAKIYFKRDELNHTGSHKINNCLGQILLAKR
MGKTRIIAETGAGQHGVATATVCARFGLPCVVYMGATDVERQKPNVFRMKLLGAEIVPVT
AGAGTLKDAMNEALRDWVTNVDSTYYLIGTAAGPHPYPELVRDFQSVIGQEVREQMLAAE
GRLPDALVAAVGGGSNAIGLFHPFLDDASVAIYGVEAGGKGLDGHEHCASLNAGRPGVLH
GNRTYLLQDGDGQILEGHSISAGLDYPGIGPEHAWLKDTGRVTYVPATDDEALAAFQMLT
RVEGIIPALEPAHALAQVIKLAPTMDRDKIIVMNLCGRGDKDVFTVGKILGFDL

NT seq 1245 nt +upstreamnt +downstreamnt
ttgacgaccatcgcgaacaccctgcggtcgggtcccgacgcacgcggccatttcggcatc
tatggcggccgctacgtggccgagaccctgatgccgctgatcctcgacctcgagcaggcc
tatgccgacgccaaggccgatccggcgttccgcgccgagctggacgacctcaacacccat
tacaccggccggccctcgccgctctatttcgccgagcggctgacggagcatcttcgtgag
gtttctgaggcctccggcctcgggggcggcgcgaagatctacttcaagcgcgacgaactc
aaccacaccggcagccacaagatcaacaactgcctcggccagatcctcctggccaagcgc
atgggcaagacgcgcatcatcgccgagaccggcgccggacagcacggcgtcgccaccgcc
accgtctgcgcccgcttcggcctgccctgcgtggtctacatgggcgccaccgacgtcgag
cggcaaaagcccaacgtgttccgcatgaaactgctcggcgccgagatcgtgccggtcacc
gccggcgccggcacgctcaaggatgccatgaacgaggccctgcgcgactgggtcaccaac
gtcgacagcacctattatctcatcggcaccgccgccggcccgcacccctatccggaactg
gtgcgcgacttccagtcggtcatcggccaggaggtgcgcgagcagatgctggcggccgag
ggccgcctgccggatgcgctggtcgccgccgtcggcggcggctccaacgccatcggcctg
ttccatcccttcctcgacgacgcctcggtggcgatctacggcgtcgaggccggcggcaag
ggtctcgacggccacgagcactgcgcctcgctcaacgccggccggcccggcgtgctgcac
ggcaaccgcacctacctgctgcaggacggcgacggccagatcctcgagggccactcgatc
tcagccggcctcgactatcccggcatcggcccggagcatgcctggctgaaggacaccggc
cgcgtcacctacgtgccggcgaccgacgacgaggcgctcgccgccttccagatgctgacc
cgcgtcgagggcatcatcccggcgctggagccggcccatgcgctcgcccaggtcatcaag
ctggcgccgaccatggacagggacaagatcatcgtcatgaacctgtgcggtcgcggcgac
aaggacgtcttcaccgtcggcaagatcctcggcttcgatctctga

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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