KEGG   Polymorphum gilvum: SL003B_2885
Entry
SL003B_2885       CDS       T01458                                 
Name
(GenBank) ABC peptide transporter, fused ATPase domains
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
pgv  Polymorphum gilvum
Pathway
pgv02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SL003B_2885
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pgv02000]
    SL003B_2885
Transporters [BR:pgv02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    SL003B_2885
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 AAA_22 AAA_16 SMC_N AAA_29 NACHT AAA_33 AAA_25 AAA_5 Mg_chelatase nSTAND3 ATP-synt_ab AAA RsgA_GTPase MMR_HSR1 DUF5906
Other DBs
NCBI-ProteinID: ADZ71308
UniProt: F2J6D4
Position
3105021..3106658
AA seq 545 aa
MALLDLDAVCLHIGGTPILDGLSLSVDRGEVVGLVGESGSGKSMTALSVLRLLPHGARLS
GRILFDGRDIAALDEAALCALRGNEIGMVFQEPMTALNPVRTVGDQVAESLICHGKANRA
EARRRAADLLARVGLPAERQSPERFPHQLSGGQRQRVVIAMAIACGPKLLIADEPTTALD
VTIQAQILTLLKDIVRAERMGLLLISHDLAVVADMAERVAIMKDGAIVETGPTAALFRTF
SHPYSRRLFEASGHVPVRAPVPAAPATGAAQTPLLSVEGLECRYPLPRDGLLSPRRHLRA
VDGVSFSLGAGESLGLVGESGCGKSTLARALLGLQAPSQGTIRIGGRDPYASRGAALKAL
RKDVQVVFQDPYGSFDPRHRIARTIGEPLHLLPALTAAERRERVAEALVSVGLSARDGEK
YPHEFSGGQRQRIAIARALVTEPKLIVADEPVSALDMSIRAQILDLFADLQARFGLAYLF
ISHDLAVVRAITEKVMVMNAGRIVERGATQAMFDAPEHPYTRLLVASAPDLEASLRRREA
QEAVP
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggcgttgcttgaccttgacgccgtctgtctgcacatcggcggcacgccgatcctcgac
ggcctgtcgctgtcggtcgaccgcggcgaggtggtcggcctggtgggggaaagcggctcg
gggaagtcgatgacggcgctgtccgtgctgcgcttgctgccgcacggcgcgcgcctgtcg
ggccggatcctgttcgacggccgagacatcgccgcgctggacgaggccgcgctgtgcgcc
ttgcgcggcaacgagatcggcatggtgttccaggagccgatgaccgccctcaacccggtg
cggacagtgggcgaccaggtcgccgagagcctgatctgtcacggcaaggccaaccgcgcc
gaggcccgccgccgggcggccgatctgctggcgcgggtcggcctgccggccgagcgccag
tcgcccgagcggtttccgcaccagctgtccggagggcagcgccagcgggtggtcatcgcc
atggcgatcgcctgcgggccgaagctgctgatcgccgacgagccgaccacggcgctcgac
gttaccatccaggcccagatcctgaccctgctgaaggacatcgtgcgcgcggagcggatg
ggcctgctgctgatcagccacgacctcgccgtcgtcgccgacatggccgaacgggtggcg
atcatgaaggatggcgcgatcgtcgagaccggaccgaccgccgcgctgttccgcaccttc
tcccacccctattcgcgccgcctgttcgaggcgtccggccatgtgccggtccgtgcgccg
gtcccggccgcgccggcgacaggcgcggcgcagacgccgctgctttcggtcgaggggctg
gagtgccgctatcccctgccccgggacggcctgctctcgccgcgccggcatctgcgcgcc
gtcgacggcgtctcgttctcgctcggcgcgggcgagagcctcggcctggtcggggaatcg
ggctgcggcaagtcgaccctcgcccgtgccctgctcggcctgcaggcgccgtcgcagggc
acgatccgcatcggcgggcgagatccctatgcgtcgcgcggcgcggcgctgaaggccctg
cgcaaggacgtgcaggtggtgttccaggatccctacggcagcttcgacccgcgccacagg
atcgcccgcacgatcggcgagccgctgcacctgctgcccgcgctgacggcggccgagcgg
cgcgagcgggtggcggaggcgctcgtctccgtcggcctgagcgcccgcgacggcgagaaa
tatccgcacgaattctccggcggccagcgtcagcgcatcgccatcgcacgggccctggtc
accgagccgaagctgatcgtcgccgacgagccggtgtcggccctcgacatgtcgatccgg
gcgcagatcctcgacctgttcgccgacctgcaggcccgcttcggccttgcctatctgttc
atctcgcacgatctcgcggtggtgcgggcgatcaccgagaaggtgatggtgatgaacgcc
ggccggatcgtcgagcgcggggcgacgcaggcgatgttcgatgcgcccgaacacccctac
acgcgcctgctggtcgcctccgcgccggatctggaggcgagcctgcggcgccgcgaggcg
caagaagcagtcccgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (2)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (31)   

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