KEGG   Polymorphum gilvum: SL003B_3245Help
Entry
SL003B_3245       CDS       T01458                                 

Gene name
fadB
Definition
3-hydroxyacyl-CoA dehydrogenase
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
pgv  Polymorphum gilvum
Pathway
Fatty acid metabolism
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Module
beta-Oxidation
Class
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:pgv00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:pgv00650]
Metabolism; Lipid metabolism; Fatty acid metabolism [PATH:pgv00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:pgv01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:pgv00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:pgv00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:pgv00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:pgv00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:pgv00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:pgv00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:pgv00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3499651..3501867
Genome map
AA seq 738 aa AA seqDB search
MTYKNFTLETDADGIALITWDMPGKSMNVIDMSVMDELDALVDAVVADAAIKGAVITSGK
PAFTGGADLTMLGGLLKGYHKDRTKDPEGAARALLDGSRRLSLIYRKLETCGKPFVAAIN
GTCMGGGTELALACHARVGVEDDSFKMGLPEVKVGLFPGAGGTQRVMRMTDGQAGMQFLL
QGQTLRAAKAKAMKLIDETAPAKKLVDTAKKLIKTGVDPVKPWDKKGFKLPNGPIYSPAG
FQFWPAANAIYRRETCDNYPGARYLLQSVYEGLQLPMDLALQVESRYFAHVLQTPEAAAM
IRSLFVSMQELNKLARRPADQRPNKIRKIGILGAGFMGAGIAYVTAQAGINVVLIDRDQE
AADKGKAHSDQLMAKAIQRGRATEAEKEKLLARIDATADYDRLADCDLVIEAVFEDREVK
RVVTEKAEAVMKPRAIYASNTSTLPITSLAEASKRPKNFIGIHFFSPVDKMMLVEVIVGR
KTSDRALAMALDYIKAIRKTPIVVNDSRGFYTSRVVMTYIREGLMMLADGVPAAMIENAG
KMAGMPVGPLSLGDEVALDLAWKIVSATRKDLGVAYVEGPLDNILEEMVVKRERFGRKNG
KGFYDYAGRDKALWPGIVEVVGKPKPADAFNVEEIKQRLLVMQALETARIFEENCLTDVR
EADVGSILGFGFAPYTGGTLSYIDRMGTAAFVDLCRKFTRKWGPRFKPNRLLREMAKANE
SFYGRFPPAGEVKARDAA
NT seq 2217 nt NT seq  +upstreamnt  +downstreamnt
atgacctacaagaatttcaccctggaaaccgatgccgacggcatcgccctgatcacctgg
gacatgccgggcaagtcgatgaacgtcatcgacatgagcgtcatggacgagctcgacgcg
ctggtcgacgccgtcgtcgccgatgcggcgatcaagggcgccgtgatcacctccggcaag
ccggccttcaccggcggcgccgacctgaccatgctggggggcctgctcaagggctaccac
aaggacaggacgaaggatccggagggcgcggcgcgggccctgctcgacggctcgcgccgg
ctgtcgctgatctaccgcaagcttgagacctgcggaaagccgttcgtcgccgcgatcaac
ggcacctgtatgggcggcggcaccgagttggcgctggcctgccacgcgcgcgtcggcgtc
gaggacgacagcttcaagatgggcctgccggaagtgaaggtcggcctgttcccgggtgcc
ggcggcacacagcgcgtcatgcgcatgaccgacggccaggccggcatgcagttcctgctg
cagggccagaccctgcgcgctgccaaggccaaggcgatgaagctcatcgacgagaccgcg
ccggcgaagaagctggtcgacacggccaagaagctcatcaagaccggcgtcgatccggtc
aagccttgggacaagaagggcttcaagctgccgaacgggccgatctattcacccgccggc
ttccaattctggccggcggccaacgccatctaccggcgcgagacctgtgacaactatccg
ggcgcgcgctacctgctgcagtcggtctacgaggggctgcagctgccgatggacctggcg
ctgcaggtcgagagccgctacttcgcccacgtgctgcagacgccggaagcggccgcgatg
atccgctctctgttcgtctccatgcaggagttgaacaagctcgcgcgccggccggcggac
cagcggcccaacaagatccggaagatcggcatcctcggtgccggcttcatgggtgccggc
atcgcctatgtcaccgcccaggccggcatcaacgtggtgctgatcgaccgcgaccaggag
gctgccgacaagggcaaggcccattccgaccagttgatggccaaggcaatccagcgcggc
cgggcgaccgaggccgagaaggagaagctgctggccaggatcgacgccaccgccgactac
gaccggctcgccgactgcgacctggtcatcgaggcggtgttcgaggaccgcgaggtcaag
cgcgtggtcaccgaaaaggccgaggcggtcatgaagccgcgcgccatctacgcgtccaac
acctcgacgctgccgatcacctcgctggcggaagcctcgaagcggccgaagaacttcatc
ggcatccatttcttctcgccggtcgacaagatgatgctggtcgaggtgatcgtgggcagg
aagacctccgaccgcgcgctggccatggcgctcgactatatcaaggcgatccgcaagacg
ccgatcgtcgtcaacgacagccggggcttctacacctcgcgcgtggtcatgacctacatc
cgcgaggggctgatgatgctcgccgacggcgtgccggcggcgatgatcgagaacgccggc
aagatggccggcatgccggtcggcccgctgtcgctcggcgacgaggtggcgttggacctt
gcctggaagatcgtctcggcaacccgcaaggatctcggcgttgcctacgtcgaaggcccg
ctcgacaacatcctggaagagatggtggtcaagcgcgagcgcttcggccgcaagaacggc
aaaggcttctacgactacgccgggcgcgacaaggcgctctggccgggcatcgtcgaggtg
gtcggcaaacccaagccggcggatgccttcaacgtcgaggagatcaagcagcgactgctc
gtgatgcaggcgctggaaaccgcccgcatcttcgaggagaactgcctgaccgacgtgcgc
gaggcggatgtcggctcgatcctcggcttcggcttcgccccctacaccggcggcacgctc
agctacatcgatcgcatgggcaccgccgctttcgtcgacctgtgccggaaattcaccagg
aaatggggaccgcgcttcaagccgaaccgactgctgcgcgagatggccaaggcgaacgaa
agcttctacggccgcttcccgccggccggagaggtcaaggcgcgcgacgcggcctga

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