KEGG   Polymorphum gilvum: SL003B_3455
Entry
SL003B_3455       CDS       T01458                                 
Name
(GenBank) 60 kDa chaperonin
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
pgv  Polymorphum gilvum
Pathway
pgv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pgv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SL003B_3455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgv03019]
    SL003B_3455
   03110 Chaperones and folding catalysts [BR:pgv03110]
    SL003B_3455
   03029 Mitochondrial biogenesis [BR:pgv03029]
    SL003B_3455
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pgv04147]
    SL003B_3455
Enzymes [BR:pgv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SL003B_3455
Messenger RNA biogenesis [BR:pgv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SL003B_3455
Chaperones and folding catalysts [BR:pgv03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SL003B_3455
Mitochondrial biogenesis [BR:pgv03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SL003B_3455
Exosome [BR:pgv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SL003B_3455
  Exosomal proteins of other body fluids (saliva and urine)
   SL003B_3455
  Exosomal proteins of breast cancer cells
   SL003B_3455
  Exosomal proteins of colorectal cancer cells
   SL003B_3455
  Exosomal proteins of bladder cancer cells
   SL003B_3455
SSDB
Motif
Pfam: Cpn60_TCP1 LCIB_C_CA
Other DBs
NCBI-ProteinID: ADZ71877
UniProt: F2J042
Position
3733132..3734772
AA seq 546 aa
MAAKDVKFGTDAREKMLRGVDILANAVKVTLGPKGRNVVLDKAFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDVAGDGTTTATVLAQSIVKEGAKAVAAGMNPMDLKRGI
DLAAAEAVKYLVANSKTITTSEEVAQVGTISANGDTQVGKDIAEAMQKVGNEGVITVEEA
KSLETELEVVEGMQFDRGYLSPYFVTNAEKMLAELEKPYILLHEKKLSNLQAMLPILESV
VQSGRPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVTLDMLGKAEKVSISKENTTIVDGAGAKEDIQGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVDDALNATRAAVEEGIVPGGGTALL
RAKSAVEKLTSDNADIQAGIKIVLRALESPIRQIVENAGVEGSIVVGKIQENNDPSFGFD
AQSETYVNMIQAGIIDPTKVVRTALQDAASVAGLLITTGAMVAELPKKEAPAMPAGGMGG
MGGMDF
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggcagctaaggacgtaaagttcggcaccgacgcccgcgagaagatgctccgcggcgtc
gacattctggccaacgccgtgaaggtcaccctcggcccgaagggccgtaatgtcgttctc
gacaaggccttcggcgctccgcgcatcaccaaggacggcgtgtcggtcgccaaggaaatc
gagctggaagacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcgtcgaag
accaacgacgtcgccggtgacggcaccacgaccgcgaccgttctcgcccagtcgatcgtc
aaggaaggtgccaaggcggttgccgccggcatgaacccgatggacctgaagcgcggcatc
gacctcgccgccgccgaggccgtcaagtacctggtcgccaactccaagaccatcaccacc
tcggaagaagtggcccaggtcggcaccatttcggccaacggcgacacccaggtcggcaag
gacatcgccgaggcgatgcagaaggtcggcaacgagggcgtgatcaccgtcgaggaagcc
aagtcgctcgagaccgaactcgaggtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaacgccgagaagatgctcgccgagctggagaagccctacatc
ctcctgcacgagaagaagctgtccaacctgcaggccatgctgccgatcctggaatccgtc
gtgcagtccggccggccgctgctgatcgtcgctgaagacgtcgaaggcgaggcactcgcc
acgctcgtcgtcaacaagctgcgtggcggcctgaagatcgccgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggcacggtg
atctccgaagatctcggcatcaagctcgagaacgtcaccctcgacatgctcggcaaggcc
gagaaggtgtccatctccaaggagaacaccaccatcgtcgacggcgccggcgccaaggag
gacatccagggccgcgtcgcgcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgcgagaagctgcaggagcgtctggccaagctggcgggcggcgtggccgtcatccgc
gtcggcggcgcgaccgaaatcgaggtgaaggaaaagaaggaccgcgtcgacgacgccctg
aacgcgacccgcgcggccgtggaagaaggcatcgtcccgggtggcggcaccgcgttgctg
cgcgccaagtcggcggtcgagaagctgacctccgacaacgccgacatccaggccggcatc
aagatcgtcctgcgcgcccttgagtccccgatccgccagatcgtcgagaacgccggcgtg
gaaggctcgatcgtggtcggcaagatccaggagaacaacgatccgtcgttcggcttcgac
gcccagtccgagacctacgtcaacatgatccaggccggcatcatcgacccgaccaaggtc
gtgcgcacggccctgcaggacgccgcctcggtggccggcctgctgatcaccactggcgcc
atggttgccgagctgccgaagaaggaagcaccggcgatgccggccggcggcatgggcggc
atgggcggcatggacttctaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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