KEGG T01458: SL003B

Polymorphum gilvum: SL003B_4234

Entry

SL003B_4234 CDS T01458

Gene name

mdh

Definition

malate dehydrogenase 1

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

pgv Polymorphum gilvum

Pathway

pgv00020	Citrate cycle (TCA cycle)
pgv00620	Pyruvate metabolism
pgv00630	Glyoxylate and dicarboxylate metabolism
pgv00680	Methane metabolism
pgv01100	Metabolic pathways
pgv01110	Biosynthesis of secondary metabolites
pgv01120	Microbial metabolism in diverse environments

Module

pgv_M00009	Citrate cycle (TCA cycle, Krebs cycle)
pgv_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:pgv00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:pgv00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:pgv00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:pgv00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C Glyco_hydro_4 UDPG_MGDP_dh_N F420_oxidored

Other DBs

NCBI-GI:

328545848

NCBI-GeneID:

10421562

UniProt:

F2IVD3

Position

complement(4544846..4545808)

AA seq 320 aa
MARNKIALIGSGQIGGTLAHLAGLKELGDIVLFDIAEGVPQGKALDIAESSPVDGFDAKL
AGANSYEAIEGADVVIVTAGVPRKPGMSRDDLLEINLKVMEQVGAGIAKYAPNAFVICIT
NPLDAMVWALQKFSKLPASKVVGMAGVLDSARFRYFIADEFNVSVEDVTAFVLGGHGDTM
VPLTRYSTVAGIPLTDLVKMGWCTAERLEQIVQRTRDGGAEIVGLLKTGSAFYAPASSAI
AMAESYLKDKKRVLPCAAALDGQYGLKDTYVGVPVVIGAGGVERIIEIDMNADEKAMFDK
SVASVDGLVEACKKIQPALA

NT seq 963 nt +upstreamnt +downstreamnt
atggcgcggaacaagattgctttgatcggctctgggcagatcggcggaacgctcgctcat
cttgccggtctcaaggaactcggggacattgtccttttcgacatcgccgagggcgtgccg
cagggcaaggcgctcgacatcgccgaatcctcccccgtcgacggcttcgatgccaagctt
gccggcgccaacagctatgaggccatcgagggcgccgacgtcgtcatcgtcaccgcgggc
gtgccgcgcaagccgggcatgagccgcgacgacctgctcgagatcaatctcaaggtgatg
gaacaggtcggcgccggcatcgccaagtatgccccgaacgccttcgtcatctgcatcacc
aacccgctcgacgccatggtctgggcgctgcagaagttctccaagctgcccgccagcaag
gtcgtcggcatggccggcgtgctcgacagcgcccgcttccgctatttcatcgccgacgag
ttcaacgtttcggtcgaggacgttaccgccttcgtgctcggcggccacggcgacacgatg
gtgccgctgacccgctactccacggttgccggcatcccgctcaccgacctggtcaagatg
ggctggtgcacggccgagcgcctggaacagatcgtccagcgcacccgtgacggcggcgcc
gagatcgtcggcctgctcaagaccggctcggccttctacgcgccggcctcctcggccatc
gccatggccgaatcctacctgaaggacaagaagcgcgtgctgccctgtgccgctgccctc
gacggccagtacggccttaaggacacctacgtcggcgtgccggtggtgatcggcgccggc
ggcgtcgagcgcatcatcgagatcgacatgaacgccgatgagaaggccatgttcgacaag
tccgtcgcctcggtcgacggtctggtcgaggcctgcaagaagatccagccggcgctcgcc
tga

All links

Pathway (9)   
   KEGG PATHWAY (7)   
   KEGG MODULE (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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