KEGG   Pseudoalteromonas translucida TAC125: PSHAa0003
Entry
PSHAa0003         CDS       T00282                                 
Symbol
recF
Name
(GenBank) gap repair protein with nucleoside triP hydrolase domain, part of RecFOR complex that targets RecA to ssDNA-dsDNA junction
  KO
K03629  DNA replication and repair protein RecF
Organism
pha  Pseudoalteromonas translucida TAC125
Pathway
pha03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PSHAa0003 (recF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pha03400]
    PSHAa0003 (recF)
DNA repair and recombination proteins [BR:pha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     PSHAa0003 (recF)
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_21 AAA_15 AAA_13 AAA_27 ATPase_2 AAA_29 ABC_tran DUF2813 nSTAND3 AAA NACHT AAA_16
Other DBs
NCBI-ProteinID: CAI85117
UniProt: Q3IDE8
Position
I:2675..3769
AA seq 364 aa
MSLSHLSLKYFRNIEALTLEPVNGVNIIYGENGSGKTSLLEAIYYLSHGKSFRTSKHKSI
IAHQQEQFVIHGRKAIHDLSIPIGISKTQAGETNLKIQGKASRKISELAQLMPVQIITPE
SYSLFFGGPKERRKFLDLGLFHVEHEFFFLWQSFNKVLKQRNALLKSKPKNYFDQIKFWD
KEFVRLAEQINKLRMAYISRFKQQFFDKMCAELTLIRDLEISFNAGWKESESLSDALELN
FERDARQGFTSKGPHKADFSFSVAGSSVENIFSRGQLKLLLYALKVTQNSLIESETDKQS
ILLIDDLPSELSEDTKEKVGQLLAHCSSQIFISSILSESISAVVEPMQRELQMFHVKHGN
LITR
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgagcttaagtcatttgagcctcaaatattttcgtaatattgaggcgctgacgctagaa
ccagttaacggcgttaatataatttatggtgaaaacggcagcggaaaaaccagcctttta
gaagctatttattacctttcacacggcaaatcttttagaacatcaaagcataaaagtatt
attgcgcatcagcaagagcagtttgtaatccatggccgcaaagctatacacgacttatct
attcctattggtattagtaaaacccaagcgggcgaaacgaatttaaaaattcaaggtaag
gcgagccgaaaaatatcagaacttgcacagcttatgccggtacaaataattactccagag
agttactcgttattttttggtgggcctaaagagcgcagaaagtttttagatttaggtttg
ttccacgtggaacatgagtttttctttttatggcaatcgttcaataaagtgttaaaacaa
cgaaatgcgctactaaaaagtaagccaaagaattattttgaccaaattaagttttgggac
aaagaatttgttagactggctgagcaaataaataaattaagaatggcgtatataagtagg
tttaagcagcagttttttgataaaatgtgtgcagaattaacgctaatacgcgatttagaa
ataagctttaatgccggctggaaagagagcgaatctcttagcgatgcattagagttaaac
tttgagcgagatgctcgccaaggttttactagtaaagggcctcataaggctgattttagt
tttagtgtcgctggcagcagcgttgagaatattttctctcgtggacaattaaagctatta
ctttatgcgttaaaagtaacgcaaaatagcttaattgagtcagagacagataagcaatct
atattgctaatagatgatttaccttcagagttaagcgaagatacaaaagagaaagtgggg
caactattagctcactgcagttctcaaatttttatatcttcaattttgtctgaaagtatt
tctgctgtggtggaacccatgcaacgagaactgcaaatgttccacgtgaaacatggcaac
ctaataacaagataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (233)   
   KEGG ORTHOLOGY (1)   
   RefGene (230)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (14)   
   Pfam (14)   
All databases (253)   

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