KEGG   Pseudoalteromonas haloplanktis: PSHAa0447Help
Entry
PSHAa0447         CDS       T00282                                 

Gene name
mutM
Definition
formamidopyrimidine DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pha  Pseudoalteromonas haloplanktis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:pha00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    PSHAa0447 (mutM)
Enzymes [BR:pha01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     PSHAa0447 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     PSHAa0447 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
I:467259..468035
Genome map
AA seq 258 aa AA seqDB search
MGITPHVLNQVVTKVNIHNGSMRWPVPDDVYQLTGLTVTGVERRAKYLLLHCALGSTILH
LGMSGNLRVVSANEPLKKHDHIEFIFANGKALRLNDPRRFGCCLWQAPGSVHKLLAKLGP
EPLTDEFFAKQVYQQSRNKKVPVKQFIMNNAIVVGVGNIYANESLFKAGIDPRREAGKVS
LKSFEALIPIIKDTLAAAITQGGTTLKDFAQSDGKPGYFAQQLLVYGRKGQPCLVCKSEL
QEVRLGQRSTVFCGKCQK
NT seq 777 nt NT seq  +upstreamnt  +downstreamnt
atgggcataaccccgcatgttttaaatcaagttgttactaaggtaaatattcataatggc
agcatgcgttggccggtgccagacgatgtatatcagctaacaggtttaaccgtaacgggc
gttgagcgccgcgcaaaatatttgttattacactgcgcgttaggctctactattttgcat
ttaggtatgtcgggcaatttacgtgtagtaagtgctaacgagccacttaaaaaacacgat
catatagaatttatttttgctaacggtaaagcgctgcgcttaaacgatccgcgccgcttt
ggttgctgcctatggcaagcgccgggctcagttcataagttactggcaaagctcgggcct
gagccgcttactgacgagttttttgcgaagcaggtgtatcagcaatcgcgcaataaaaaa
gtgccggtaaaacaatttataatgaataacgccatcgtcgtaggggtcggtaatatttac
gctaatgaatcgttatttaaagcgggaatagaccctcgccgcgaagccggtaaagtatcg
ctgaaaagttttgaagcgcttattcctataattaaagacacgctagccgcggcaataacc
caaggtggcactaccttaaaagattttgcccaaagcgacgggaaaccgggttactttgct
cagcaacttttagtgtacggtcgtaaagggcaaccttgcttggtgtgtaaaagcgaatta
caagaagttaggctagggcaaagaagtactgtgttttgtgggaagtgtcagaagtga

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