| Entry |
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| Gene name |
holC
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| Definition |
(GenBank) DNA polymerase III, chi subunit
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| KO |
| DNA polymerase III subunit chi [EC: 2.7.7.7] |
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| Organism |
pha Pseudoalteromonas haloplanktis
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| Pathway |
| Purine metabolism | | Pyrimidine metabolism | | Metabolic pathways | | DNA replication | | Mismatch repair | | Homologous recombination |
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| Module |
| DNA polymerase III complex, bacteria |
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| Brite |
KEGG Orthology (KO) [BR:pha00001]
Metabolism
Nucleotide metabolism
00230 Purine metabolism
PSHAa2424 (holC)
00240 Pyrimidine metabolism
PSHAa2424 (holC)
Genetic Information Processing
Replication and repair
03030 DNA replication
PSHAa2424 (holC)
03430 Mismatch repair
PSHAa2424 (holC)
03440 Homologous recombination
PSHAa2424 (holC)
Enzymes [BR:pha01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSHAa2424 (holC)
DNA replication proteins [BR:pha03032]
Prokaryotic Type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSHAa2424 (holC)
DNA repair and recombination proteins [BR:pha03400]
Prokaryotic Type
SSBR (single strand breaks repair)
MMR (mismatch exicision repair)
DNA polymerase III holoenzyme
PSHAa2424 (holC)
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
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| Position |
I:2574827..2575273
 |
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| AA seq |
148 aa  
MNMNAQFFVLKQQDESLAKPDDHLALAAQIAADQYRLGQRVFICVDNENTAFAIDETLWA
FDPDSFVPHNLQGEGPKGGAPVEIGTTPPVGNRKVLINLANNLPDFIRRFNQVFDFVPVE
AVAKQAARERFKKLRQLGANITTQDINN |
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| NT seq |
447 nt  +upstreamnt +downstreamnt
atgaacatgaacgcccaatttttcgttctaaagcaacaagatgagtcgctggctaagcct
gatgatcatttggctttggcggctcaaattgccgctgatcagtatcggcttggccaacgt
gtatttatttgtgtagataacgaaaataccgcctttgccattgatgaaacactttgggca
tttgatcccgacagttttgtacctcataacctacaaggtgaaggcccaaaaggcggcgca
ccggtagaaattggtactacgccccctgttggcaatcgtaaagttttaattaacttggct
aataacttaccggattttattcgccgctttaaccaagtttttgattttgtacccgtagaa
gccgttgctaaacaagcagctcgcgagcgttttaaaaagctacgccaactcggtgctaac
atcaccacgcaagatattaataactaa |
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