KEGG T00282: PSHAa2757

Pseudoalteromonas haloplanktis: PSHAa2757

Entry

PSHAa2757 CDS T00282

Gene name

polA

Definition

multifunctional DNA polymerase I: 5'->3' exonuclease/3'->5' polymerase/3'->5' exonuclease (EC:2.7.7.7 3.1.11.3)

Orthology

K02335

DNA polymerase I [EC:2.7.7.7]

Organism

pha Pseudoalteromonas haloplanktis

Pathway

pha00230	Purine metabolism
pha00240	Pyrimidine metabolism
pha01100	Metabolic pathways
pha03030	DNA replication
pha03410	Base excision repair
pha03420	Nucleotide excision repair
pha03440	Homologous recombination

Class

Metabolism; Nucleotide metabolism; Purine metabolism [PATH:pha00230]
Metabolism; Nucleotide metabolism; Pyrimidine metabolism [PATH:pha00240]
Genetic Information Processing; Replication and repair; DNA replication [PATH:pha03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:pha03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:pha03420]
Genetic Information Processing; Replication and repair; Homologous recombination [PATH:pha03440]

SSDB

Motif

Pfam:

DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc

Other DBs

NCBI-GI:

77361672

NCBI-GeneID:

3709906

UniProt:

Q3IJF9

Position

I:complement(2927964..2930699)

AA seq 911 aa
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVINMLKSLIRQYDPSHMVV
IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHRIIKAMGFPLISIEGVEADDVIGT
FARIASEQKRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPVTVVEKFGVGPELIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLEKYGSLQGVMDNASEIKGKIGEKLAAALDHLPLSY
QLATIKCDVEVESDLDTFKLQEPNKDELIALYGECEFRRWLAELLDNPKDTETHLAVPTE
ANEVPKVAEAQYETILTESQFDALIEQLNDAELFAFDTETTSLDYMQAQLVGMSFAVKAG
EAAYLPVAHDYPGAPEQLSLEFVMQKLGPILADAKKAKVGQNLKYDKSVLANAGYQLNGI
KFDTMLESYVLNSVGTRHDMDSLALKFLGHKNISFEDIAGKGKKQLTFNQVELDKAGPYA
AEDADITLRLHQVLWPKLAADEKLKSVFEDIEMPLVNVISDIERTGVAIDSKMLAAHSQR
LGERLLELEKEAYEIAGEPFNLSSPKQLQVLLFEKLELPIIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNEKTQRVHTSYHQAVTATGRLSSTDPNLQN
IPIRSEEGRRIREAFIAADGYKIVAADYSQIELRIMAHLSQDKGLLSAFANGLDVHSATA
AEVFGVSLEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAAESGYVETIFGRRLYLPEIKAQNGARRKGAERAAINAPMQGTAADIIKK
AMLSVHSWVYEQAPNTVKLLMQVHDELVFEIKTDCVDAYTKHICELMSQAATLDVPLIVE
ADEGDNWEQAH

NT seq 2736 nt +upstreamnt +downstreamnt
atggctcagatccccgaaaacccacttattttagttgatggctcttcatatttatttcgt
gcttatcattcaccgccacatttaactaactcaaaaggtgaagcgaccggagcgatatat
ggtgtgatcaacatgctaaaaagtttgatcagacaatatgatccctcgcatatggtggtt
atatttgacgctaaaggcaaaacctttagaaatgacatgtatagcgaatataaagcgaac
cgtccgccaatgccagatgacttacgcacgcaaatagcgccaatccaccgtattattaag
gcaatgggttttccgcttattagcattgaaggtgttgaagccgacgatgtaattggtacg
tttgcgcgcatagcttcagagcaaaagcgccacgtactggtttctaccggcgataaagat
atggcgcagttggtaaatgaacatgtaacgcttataaacaccatgaccgacagtatctcg
gatcctgttactgtagttgaaaagtttggtgtgggcccagagcttattatcgattattta
gctttaatgggcgataaagtagataacattccaggggtagaagggtgtggtcctaaaact
gcggttaagtggttagaaaaatacggatcgctacagggcgttatggataatgccagcgag
atcaaaggtaaaataggagaaaagttagcagctgcgctagatcatctgcctttaagctat
caacttgctactattaagtgtgatgttgaggttgagtcggatcttgatacctttaagtta
caagagcccaataaagatgagctaattgcgctttatggtgaatgtgaatttcgtcgttgg
ttagctgagttactcgataaccctaaagataccgaaacacacttagctgttcccactgag
gctaacgaagtaccaaaagtagcagaggcacaatacgaaactattttaaccgagagccag
tttgatgcattaatagagcagctaaatgatgctgagctatttgcctttgatacagaaaca
accagccttgattacatgcaagcacagttagtaggtatgagctttgcggtaaaagccggt
gaagctgcttatttacccgttgctcacgactatccgggtgcacctgagcaactaagcctt
gagtttgtaatgcaaaaattaggacctattctagccgatgccaaaaaagctaaagtaggg
caaaaccttaaatacgataaaagcgtattagcaaatgcgggttatcaattaaacggtatt
aagtttgataccatgcttgaatcgtatgtgcttaacagtgtgggtacgcgccatgatatg
gattcactggcacttaaatttttaggccataaaaatatcagctttgaagatattgctggt
aaaggtaaaaagcaacttacttttaatcaagtagagctagataaagccggcccctatgcc
gctgaagatgcagatattacgctgcgtttacaccaagttttatggccaaaattagccgct
gacgaaaaactaaaatcagtattcgaagatatagaaatgccactggttaatgttatttct
gatattgaacgcactggtgtagcaatagacagcaaaatgcttgctgcgcacagccaacgc
ttaggcgagcgtttattggagctggaaaaagaagcgtatgaaatagcgggtgaaccattt
aatttaagttctccaaaacaactacaagtattgttgtttgaaaaactggaactgccaata
attaaaaaaacgcctaaaggcgcgccttctaccgcagaagaagtattacaagaattagcg
cacgactatccactgcctaaagtaattattgagcaccgtggtttatcaaagcttaaatca
acctataccgacaaattaccgttaatggttaacgagaaaacgcagcgtgtgcatacctcg
tatcatcaagccgtaacggcaactgggcgtttaagttcaaccgatcctaatttacaaaat
attccaattcgctcagaagaagggcgtcgtattcgtgaagcgtttatagcggccgatggc
tataaaattgtcgctgccgattatagccaaattgagctacgtataatggcgcatctttca
caagataaaggtttattaagtgcgttcgctaatggtttagacgtgcacagtgccactgca
gcagaagtatttggtgtaagtttagaagaagtgaccagcgatatgcgtcgtaaagctaaa
gcggttaactttggcttaatttatggcatgtcggcatttggtttagcacgtcagctggat
gtgccacgccatgaagcgcagcattatattgataaatattttgagcgtttcccaggtgtt
ttagagtatatggaaacaacgcgtgaaaaggccgctgaaagcggttatgtagagactatt
tttggacgccgtttatatttaccagaaataaaagcccaaaatggtgcacgaagaaaagga
gctgagcgcgcagcaatcaatgcgccaatgcaaggcactgctgccgatatcattaaaaag
gcaatgttaagtgtacacagttgggtatacgagcaagctcccaataccgttaagctatta
atgcaagtacacgatgagttggtatttgaaattaaaacagactgtgttgatgcttacaca
aagcatatttgcgaactaatgtcgcaagcggctactcttgatgtaccacttatagttgaa
gctgatgaaggcgacaactgggaacaggctcactaa

All links

Pathway (7)   
   KEGG PATHWAY (7)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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