KEGG   Pedobacter heparinus: Phep_3797
Entry
Phep_3797         CDS       T00978                                 
Name
(GenBank) Heparinase II/III family protein
  KO
K19052  heparan-sulfate lyase [EC:4.2.2.8]
Organism
phe  Pedobacter heparinus
Brite
KEGG Orthology (KO) [BR:phe00001]
 09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    Phep_3797
Enzymes [BR:phe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.8  heparin-sulfate lyase
     Phep_3797
SSDB
Motif
Pfam: Hepar_II_III_N Hepar_II_III
Other DBs
NCBI-ProteinID: ACU05988
UniProt: Q59289
Structure
Position
4555892..4557904
AA seq 670 aa
MLTINLNLKDCMTTKIFKRIIVFAVIALSSGNILAQSSSITRKDFDHINLEYSGLEKVNK
AVAAGNYDDAAKALLAYYREKSKAREPDFSNAEKPADIRQPIDKVTREMADKALVHQFQP
HKGYGYFDYGKDINWQMWPVKDNEVRWQLHRVKWWQAMALVYHATGDEKYAREWVYQYSD
WARKNPLGLSQDNDKFVWRPLEVSDRVQSLPPTFSLFVNSPAFTPAFLMEFLNSYHQQAD
YLSTHYAEQGNHRLFEAQRNLFAGVSFPEFKDSPRWRQTGISVLNTEIKKQVYADGMQFE
LSPIYHVAAIDIFLKAYGSAKRVNLEKEFPQSYVQTVENMIMALISISLPDYNTPMFGDS
WITDKNFRMAQFASWARVFPANQAIKYFATDGKQGKAPNFLSKALSNAGFYTFRSGWDKN
ATVMVLKASPPGEFHAQPDNGTFELFIKGRNFTPDAGVFVYSGDEAIMKLRNWYRQTRIH
STLTLDNQNMVITKARQNKWETGNNLDVLTYTNPSYPNLDHQRSVLFINKKYFLVIDRAI
GEATGNLGVHWQLKEDSNPVFDKTKNRVYTTYRDGNNLMIQSLNADRTSLNEEEGKVSYV
YNKELKRPAFVFEKPKKNAGTQNFVSIVYPYDGQKAPEISIRENKGNDFEKGKLNLTLTI
NGKQQLVLVP
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgctaaccattaatctaaatcttaaagattgcatgactacgaaaatttttaaaaggatc
attgtatttgctgtaattgccctatcgtcgggaaatatacttgcacaaagctcttccatt
accaggaaagattttgaccacatcaaccttgagtattccggactggaaaaggttaataaa
gcagttgctgccggcaactatgacgatgcggccaaagcattactggcatactacagggaa
aaaagtaaggccagggaacctgatttcagtaatgcagaaaagcctgccgatatacgccag
cccatagataaggttacgcgtgaaatggccgacaaggctttggtccaccagtttcaaccg
cacaaaggctacggctattttgattatggtaaagacatcaactggcagatgtggccggta
aaagacaatgaagtacgctggcagttgcaccgtgtaaaatggtggcaggctatggccctg
gtttatcacgctacgggcgatgaaaaatatgcaagagaatgggtatatcagtacagcgat
tgggccagaaaaaacccattgggcctgtcgcaggataatgataaatttgtgtggcggccc
cttgaagtgtcggacagggtacaaagtcttcccccaaccttcagcttatttgtaaactcg
ccagcctttaccccagcctttttaatggaatttttaaacagttaccaccaacaggccgat
tatttatctacgcattatgccgaacagggaaaccaccgtttatttgaagcccaacgcaac
ttgtttgcaggggtatctttccctgaatttaaagattcaccaagatggaggcaaaccggc
atatcggtgctgaacaccgagatcaaaaaacaggtttatgccgatgggatgcagtttgaa
ctttcaccaatttaccatgtagctgccatcgatatcttcttaaaggcctatggttctgca
aaacgagttaaccttgaaaaagaatttccgcaatcttatgtacaaactgtagaaaatatg
attatggcgctgatcagtatttcactgccagattataacacccctatgtttggagattca
tggattacagataaaaatttcaggatggcacagtttgccagctgggcccgggttttcccg
gcaaaccaggccataaaatattttgctacagatggcaaacaaggtaaggcgcctaacttt
ttatccaaagcattgagcaatgcaggcttttatacgtttagaagcggatgggataaaaat
gcaaccgttatggtattaaaagccagtcctcccggagaatttcatgcccagccggataac
gggacttttgaactttttataaagggcagaaactttaccccagacgccggggtatttgtg
tatagcggcgacgaagccatcatgaaactgcggaactggtaccgtcaaacccgcatacac
agcacgcttacactcgacaatcaaaatatggtcattaccaaagcccggcaaaacaaatgg
gaaacaggaaataaccttgatgtgcttacctataccaacccaagctatccgaatctggac
catcagcgcagtgtacttttcatcaacaaaaaatactttctggtcatcgatagggcaata
ggcgaagctaccggaaacctgggcgtacactggcagcttaaagaagacagcaaccctgtt
ttcgataagacaaagaaccgggtttacaccacttacagagatggtaacaacctgatgatc
caatcgttgaatgcggacaggaccagcctcaatgaagaagaaggaaaggtatcttatgtt
tacaataaggagctgaaaagacctgctttcgtatttgaaaagcctaaaaagaatgccggc
acacaaaattttgtcagtatagtttatccatacgacggccagaaggctccagagatcagc
atacgggaaaacaagggcaatgattttgagaaaggcaagcttaatctaacccttaccatt
aacggaaaacaacagcttgtgttggttccttag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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