KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102102727
Entry
102102727         CDS       T02921                                 
Symbol
TRIM13
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM13 isoform X1
  KO
K12003  tripartite motif-containing protein 13 [EC:2.3.2.27]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Brite
KEGG Orthology (KO) [BR:phi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:phi04121]
    102102727 (TRIM13)
Enzymes [BR:phi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102102727 (TRIM13)
Ubiquitin system [BR:phi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102102727 (TRIM13)
SSDB
Motif
Pfam: zf-B_box zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4_3 Herpes_IE2_3 U-box zf-Nse
Other DBs
NCBI-GeneID: 102102727
NCBI-ProteinID: XP_005516403
Position
Unknown
AA seq 411 aa
MDMMELLEEDLTCPICCSLFDDPRVLPCSHNFCRKCLEGILEGNVRNVLWRPSPFKCPTC
RKETPVTGVNSLQVNYSLKGIVEKYNKIKVTPKMPVCKVHSGQPLNIFCRTDMQLICGVC
ATRGDHTKHVFCSIEEAYSQEKRAFETLFQGFETWRCGDALSRLDTLETSKRKALQMLTK
DSDKVKEFFEKLQHTLEQKRNEILSDFETMKLAVMQAYDPEINKLNTILQEQRMAFNIAE
AFKDVSEPIIFLQQMQEFREKIKVLKETPLPCSTVDISPTMKSFDTSQWNGIKLVDVDKL
SLPQESNTFKFKIPSVFSRRFIVNSLIFLLILAVTRMSFVESVIDNLQCWKSQFLTICLS
YLADTVEIADHAVFYWEQMTDGASLLREKCKNYTLVVLDNVAQFVCKYKLL
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggacatgatggagctcctagaagaagatctgacctgccccatttgctgtagcctgttt
gatgatcctcgtgtcctgccctgttcacacaatttctgcagaaagtgtctagaaggaatt
cttgagggaaatgtgcgaaatgtgctttggaggccatcccctttcaagtgccccacatgc
aggaaggagactcctgtcactggagtcaacagcttgcaggtcaactattccctgaaaggt
atcgtggagaagtacaacaaaatcaaagtaactccaaaaatgcctgtgtgcaaagtgcac
agcggacaaccccttaacattttttgccggacagacatgcagctgatctgtggggtttgt
gccacccgtggcgaccacacaaagcatgttttctgttccattgaggaagcttattcccag
gagaagcgggcttttgaaaccttgtttcagggcttcgaaacttggcgttgtggagatgcc
ctctcacggctggataccttagagaccagtaagaggaaagctctgcagatgctgacgaaa
gattctgacaaagtgaaggagttctttgagaagctgcaacacacgttggagcagaagcga
aatgagatcctgtctgactttgagaccatgaagcttgcagtgatgcaggcatacgatcca
gaaatcaataaactgaacacgattctacaagagcagcggatggcttttaacattgcggag
gccttcaaagatgtgtctgaacccattatatttctgcaacagatgcaggagttcagggaa
aaaatcaaggtgctcaaagaaacccctttaccttgttccactgtggacatcagtcccaca
atgaagagctttgataccagccagtggaatggaataaaacttgttgatgtggacaaactt
tccttgcctcaggaaagcaacactttcaaattcaagattccctctgtcttttcacgcaga
tttatagtgaactctcttattttcttgctcattcttgctgtcaccagaatgtcctttgtg
gagtcagtcattgacaatctccagtgctggaaatctcagttccttacaatttgcttgtcc
tatttggcagataccgtggagatagcagatcatgcagtcttttactgggaacaaatgaca
gatggagcctcacttttaagagaaaagtgtaaaaactatacgttggttgtactggataac
gttgcacagtttgtgtgcaaatataaactgttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (31)   

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