KEGG   Pseudopodoces humilis (Tibetan ground-tit): 102105199
Entry
102105199         CDS       T02921                                 
Symbol
PARK2
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
  KO
K04556  parkin [EC:2.3.2.31]
Organism
phi  Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04120  Ubiquitin mediated proteolysis
phi04137  Mitophagy - animal
phi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:phi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102105199 (PARK2)
   04120 Ubiquitin mediated proteolysis
    102105199 (PARK2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    102105199 (PARK2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phi04131]
    102105199 (PARK2)
   04121 Ubiquitin system [BR:phi04121]
    102105199 (PARK2)
   03029 Mitochondrial biogenesis [BR:phi03029]
    102105199 (PARK2)
Enzymes [BR:phi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     102105199 (PARK2)
Membrane trafficking [BR:phi04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    102105199 (PARK2)
  Aggrephagy
   Other aggrephagy associated proteins
    102105199 (PARK2)
  Xenophagy
   Other xenophagy associated proteins
    102105199 (PARK2)
Ubiquitin system [BR:phi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    102105199 (PARK2)
Mitochondrial biogenesis [BR:phi03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    102105199 (PARK2)
SSDB
Motif
Pfam: zf-RING_14 zf-RING_12 ubiquitin IBR Rad60-SLD Dsc3_N Rad60-SLD_2
Other DBs
NCBI-GeneID: 102105199
NCBI-ProteinID: XP_005527008
Position
Unknown
AA seq 464 aa
MTVFVRFNSSHGFPVEVGSDSSILQLKEAVAQRQGVPADQLRVIFAGRELSNDLTLQNCD
LAQQSIVHIVQSPQKNSHNKEETEDSCVGGVLKALKREPESLTRIDLSKSILPSVSAGLA
VILDPGKNSVSLPSEKSGAASYNSFYVFCKNFCQAVKPGKLRVRCSVCKQGTLTLARGPS
CWDDVLIPNRIGGVCQSRGCNGNIAEFYFKCGAHPTADSETSVALNLITTNSRCITCITC
TDIRSPVLVFQCVHRHVICLDCFHLYCVTMLNDRQFIHDPELGYSLPCVAGCPDSLIKEL
HHFRILGEEQYNRYQRYGAEECVLQMGGVLCPTPGCGAGLLPEPGLRRIVCQPGNGIGCG
FVFCRECKEEFHEGECNSLLSPQGAMAQKRYVVDEHAAMQARWEEASRETIKKTTKPCPN
CNIPVEKNGGCMHMKCPRPQCRFEWCWNCGLEWNRTCMGDHWFD
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgactgtgtttgtcaggttcaactccagccatggcttccccgtggaggttggttcggat
tccagcatcctccagctgaaggaggcagttgcccagcgacagggagttccagctgaccag
ctgcgggtgatttttgcagggagggagctcagcaatgacttgacactgcagaactgtgac
ctggcccagcagagcattgttcatatcgttcagagtccacagaagaacagtcataacaag
gaggaaacagaagatagctgtgttggaggtgttctaaaagccttgaaaagggaacctgag
agtttaactcgcatagatctcagtaaaagcatcctcccttcagtctctgcagggttggca
gttattctggatcctggaaaaaacagtgtttcacttccctctgaaaaatcaggtgcagca
agttacaacagtttttatgttttttgcaaaaatttctgccaagctgtgaagcctggaaaa
ctgagggtccgctgcagtgtgtgtaaacaaggaacactgacattggcaaggggcccatct
tgctgggatgacgtgctaattcccaacagaataggaggagtttgccagtcccgaggttgc
aatggaaacatagcggagttttactttaaatgtggagcacacccaactgctgacagtgaa
acatctgtggctttgaacctcattacaacaaacagccgctgtatcacatgtataacatgc
acagatatcaggagtcctgtgcttgtgtttcaatgtgtacatcgccatgtcatttgcctg
gactgcttccatttgtactgtgtgaccatgctgaatgaccgccagttcatccacgacccg
gagcttggctattccctcccctgtgtagctggctgtccagattccttgattaaagaactt
catcacttcaggattctgggagaagaacagtacaaccgctaccagcgctatggggccgag
gaatgtgtgctgcagatgggaggagtgctgtgtcccacccctggctgtggggcaggtctg
cttcctgagccagggctgaggagaatcgtgtgtcaaccaggcaacggaataggctgtggg
ttcgtgttctgccgtgaatgtaaagaagaattccatgaaggggaatgcaactctctcctc
agcccacagggagccatggcccagaagcggtatgtggttgatgagcacgcagccatgcaa
gctcgatgggaagaagcctctagagaaacaatcaagaagacaaccaagccatgccccaac
tgcaatattccagtagaaaaaaatggtggctgtatgcacatgaaatgccctcgccctcag
tgcagatttgagtggtgctggaactgtggcctggagtggaacagaacctgcatgggagat
cactggtttgactag

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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